| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0422 |
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| Symbol | |
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| ID | 6163659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 463507 |
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| End bp | 464283 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663171 |
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| Product | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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| Protein accession | YP_001789462 |
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| Protein GI | 171057113 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCGA CCGCGATCGT CAGCGCGATG GCGCAGGAGA TGGCCGCGCT GCTGGCGCTG
TGCGAGGACA CCCGCCTGCA GCGCGTGGCC GGGCGCGATT TCCACTGCGC CACGCTGCAC
GGCCAGCCGG TGGTGCTGGT GCTGTGCGGC ATCGGCAAGG TGGCGGCGGC CACCACCGCG
GTGCTGCTGG CCGAACGCTT CGGCGCGCGC CGGCTGATCT TCACCGGCGT GGCCGGCGGC
CTGGGCGCAC AGGTGCGGGT CGGTGACGTG GTGCTGGCCG AGACCCTGCT GCAGCACGAC
ATGGACGCCT CGCCGCTGTT TCCGCGCTAC GAGGTGCCGC TGACCGGCCG CTCGCATTTC
GACACCGACG CCGCCCTCAA CACGCCGCTG GCCGACGCCG TGCAGGCGGT GCTGGCGCGC
CCCGATCACC ACGGGCCGGA TGCCCAGGCG CTGGGCGTGA CCGCGCCGGT GCTGCACCGC
GGCCTGGTCA TCAGCGGCGA CCTGTTCGTC GCCACCGCAG CGCAGAGCCT GGCGCTGCAG
GGCGCGCTGC CCGAGGCGCT GGCGGTCGAG ATGGAAGGCG CCGCACTGGC GCAGGTCTGC
CATGACCTCG GCCTGCCGTG CGCGGTGCTG CGCACCATCT CCGACCGCGC CGACGATTCG
GCCCACGTCG ACTTCCTGCG TTTCATCGAC GTGGTGGCGG CGCAGGCCAG CGCGGCCATC
ATCGGCCAGT GGCTGGCGGA CGAAAGCCGG TCGCGCCAGC CCTCGCCCGT TGCCTGA
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| Protein sequence | MRPTAIVSAM AQEMAALLAL CEDTRLQRVA GRDFHCATLH GQPVVLVLCG IGKVAAATTA
VLLAERFGAR RLIFTGVAGG LGAQVRVGDV VLAETLLQHD MDASPLFPRY EVPLTGRSHF
DTDAALNTPL ADAVQAVLAR PDHHGPDAQA LGVTAPVLHR GLVISGDLFV ATAAQSLALQ
GALPEALAVE MEGAALAQVC HDLGLPCAVL RTISDRADDS AHVDFLRFID VVAAQASAAI
IGQWLADESR SRQPSPVA
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