| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0408 |
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| Symbol | |
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| ID | 6161242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 446756 |
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| End bp | 447640 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663157 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001789448 |
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| Protein GI | 171057099 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.606467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATC TCCACGTGCC GGCCACGCCC GGCAGGGATC GCATCGTCTC GATCTCGGGC
GCGCCGTACG ACGGCTACCC GGCGCCGCAC ATGTTCGAGA GCCTGGCGCG GATCGGCGCC
ACGCACGTCG AGCCGGCCTA CATCGTCGGC TACACCGAGC CGTTCGACGA GTCGTCGTTC
ACCGACGAGC GCGGCGCCGA ATACGCCCGC TGGCTGGCCG ACGCCGGCAT CGGCTGCTTC
GCGATGTCGT CGCACATCGA CCTCGGCCGG CCCGACGCAT TGGCCGTGTT CGCCGGGCGC
ATGCGCTTTG CGGCCCGCAT CGGCGCCAAG GTGATCAACA CCAACGCCAC GGCGCGCGCC
AACGAGGCGC GGTTCTTCCA GAACATCGAG CCGCTGGCCC GGCTGGCCGA ACAGCTCGAC
CTGGTGATCG GCCTGGAGAA CCCCGGCGAC GGCTCCGACA ACCTGCTCAA CACCGCCGCC
GACGCACAGG CCCTGCTGGC GCGCATCGGC CACCCGCGGG TCGGCCTGAA CTACGACGCC
GGCAACACCC TCTCGCACCG CCCGGCGGTG TCACCCGCCG ACGATGCGCT GGCCGCCATG
CCGCTGTGCC TGCACACCCA CGTGAAGGAC GTGCAGCGCC GCCCCGAAGG CTATTTCTTC
ACCGCGCTGG GCGAGGGCGA GATCGGCTGC GACCGCATCC TGCGGGCCAT CGCCGCCACG
CCTCTGAGTC TGTCGATCGA GATCCCGATG CGCCTGCATC GCGGCCCCGA CGCCCAGCCC
AGCCGCGCCG CCTGGCGTGT GCCGGTGGCC GACATCGAGG CGCGGCTGAC GGCGGCGCTG
GACTACGTTG GCCATCACCT GGCAGCGGCC CGGCAGGCGG CCTGA
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| Protein sequence | MTHLHVPATP GRDRIVSISG APYDGYPAPH MFESLARIGA THVEPAYIVG YTEPFDESSF
TDERGAEYAR WLADAGIGCF AMSSHIDLGR PDALAVFAGR MRFAARIGAK VINTNATARA
NEARFFQNIE PLARLAEQLD LVIGLENPGD GSDNLLNTAA DAQALLARIG HPRVGLNYDA
GNTLSHRPAV SPADDALAAM PLCLHTHVKD VQRRPEGYFF TALGEGEIGC DRILRAIAAT
PLSLSIEIPM RLHRGPDAQP SRAAWRVPVA DIEARLTAAL DYVGHHLAAA RQAA
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