| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0401 |
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| Symbol | |
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| ID | 6161690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 439839 |
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| End bp | 440834 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663150 |
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| Product | lipoyl synthase |
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| Protein accession | YP_001789441 |
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| Protein GI | 171057092 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.192986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG AAAACACCAC CCGCCAGGCC GAGACCGGCG CTGCCTACGA CGCCACCGCC
AAGCAGAAGG CGCAGGCCAA GACGGCGCGC ATCCCGATCA AGGTGGTGCC GGCCGAGACG
CTGAAGAAGC CCGACTGGAT CCGCGTCAAG GCTGGCTCGC CGACCACGCG CTTCTACGAG
ATCAAGAACA TCCTGCGCGA GCACCAGCTG CACACCGTCT GCGAGGAAGC CAGCTGCCCG
AACATCGGCG AATGCTTCGG CAAGGGCACC GCGACCTTCA TGATCATGGG TGACAAGTGC
ACCCGCCGCT GCCCCTTCTG CGACGTCGGC CACGGCCGGC CCGATCCGCT CGACGTCAAC
GAGCCGGCCA ATCTGGCCAA GACGATCGCG GCGCTGAAGC TCAAGTACGT CGTCATCACC
TCGGTCGACC GCGACGACCT GCGCGACGGC GGCGCCGGCC ATTACGTCGA GTGCATCCGC
CAGACCCGCG CCGCCTCGCC CGAGACGCGC ATCGAGGTGC TGGTGCCCGA CTTCCGCGGC
CGCATGGACC GCGCGCTCGA GATCCTCAAG ACCGCGCCGC CCGACGTCAT GAACCACAAC
ATGGAAACCG TGCCGCGCCT CTACAAGGAA GCGCGTCCGG GCGCCGACTA CCAGTTCAGC
CTGACGCTGC TCAAGCGCTT CAAGGAAGAA GTGCCCGGCG TGCCGACCAA GAGCGGCCTG
ATGGTCGGCC TGGGCGAGAC CGACGACGAG ATCCTCGACG TCATGCGCGA CATGCGCGCC
CACGACATCG ACATGCTGAC GATCGGCCAG TACCTGGCGC CGTCCGGCCA CCACCTGCCG
GTGCGCCGCT ACGTGCACCC GGACACCTTC AGGATGTTCG AGACCGAGGC CTACAAGATG
GGCTTCACCC ACGCCGCCGT CGGCGCGATG GTGCGCAGCA GCTACCACGC CGACCAGCAG
GCGCACCAGG CGGGCGTGGA CGGCGCGATC GGCTGA
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| Protein sequence | MSTENTTRQA ETGAAYDATA KQKAQAKTAR IPIKVVPAET LKKPDWIRVK AGSPTTRFYE
IKNILREHQL HTVCEEASCP NIGECFGKGT ATFMIMGDKC TRRCPFCDVG HGRPDPLDVN
EPANLAKTIA ALKLKYVVIT SVDRDDLRDG GAGHYVECIR QTRAASPETR IEVLVPDFRG
RMDRALEILK TAPPDVMNHN METVPRLYKE ARPGADYQFS LTLLKRFKEE VPGVPTKSGL
MVGLGETDDE ILDVMRDMRA HDIDMLTIGQ YLAPSGHHLP VRRYVHPDTF RMFETEAYKM
GFTHAAVGAM VRSSYHADQQ AHQAGVDGAI G
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