Gene Lcho_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0395 
Symbol 
ID6164016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp435283 
End bp435672 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content69% 
IMG OID641663144 
Producthypothetical protein 
Protein accessionYP_001789435 
Protein GI171057086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0802537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACG TTCTGCGCAG CCCCGACGGC CAGGTCGACA GCATCCACCG CCACGCCGTG 
CCCGGCAGCG AATTCCTGGG CGACGACGCG CCCGAGCTGC GCCAGCTGCT GGGCGACAGT
GCCGGCGGCT CGGCCGACGC TGCGTTCGCC AGCCTCGATG CCGGGCTGAT CCGGGTGCTC
GAGGACCTGG TCGACGTGCT GGTGGCGCGC AACATCATCC GCATCACCGA TCTGCCCGGC
GAGGCGCAGC ACAAGCTGTT CGCGCGCAAG AACTTCCGCG ACCGGTTCCA GCGCAATTCC
CTCGATCTGG GCGTGGCCGA CCAGGGCATG GCCGGACTGC TGAGCTTTCC CGGCACGCCC
GCCCGGCACA CGGATTTCGA TGCACTGTAA
 
Protein sequence
MPHVLRSPDG QVDSIHRHAV PGSEFLGDDA PELRQLLGDS AGGSADAAFA SLDAGLIRVL 
EDLVDVLVAR NIIRITDLPG EAQHKLFARK NFRDRFQRNS LDLGVADQGM AGLLSFPGTP
ARHTDFDAL