| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0393 |
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| Symbol | engB |
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| ID | 6164014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 433690 |
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| End bp | 434487 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663142 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_001789433 |
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| Protein GI | 171057084 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0694387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCC CCAACCCAGC TCCCACCCAA GGTGGCGCGG ACGCCACGCG CGCCGCCCTT
TCCTGGGCTC ACACGGCGCG TTTCCTGACC ACGGCGAGCC GCCTCGACCA GCTGCCGGCG
CACGATCTGC CCGAGATCGC CTTCGTCGGC CGCTCCAACG CCGGCAAGTC GACCGCGATC
AACACGCTGG CACAGCAACG CCAGCTCGCC TTCGCGTCCA AGAAGCCGGG CCGCACCCAG
CACATCAACC TGTTCGAGCT CGGCCCCAAG GACGCGCCCA GCGCGCTCTG GGCCGACCTG
CCCGGCTACG GCTACGCGGC GGTCGAGCGT GCCGCCAAGC TGCGCTGGCA GGCCGTGATG
GCCGACTACC TGAAGATGCG CCGCAACCTC GCGGGCGTGG TGCAGATGAT CGACTCGCGC
CACGGCTTCA CCGCGCTCGA CCGCCAGCTG CTCGAATTCG TCGGCCCGCG CGTGGTGACC
GGCGAGGTCA AGCTGCTGGT GCTGCTGACC AAGGCCGACA AGCTCAACCG CAAGGAGGCC
AGCGCGGCGC TGCGTTCGGC GCAGGATTTC CTGGCCGACC TGTCGACCGA CCAGTCGGAT
CTGTCGGTGA CGCTGTTCTC CGCGCTCAAG CGCCAGGGTG TCGAGGACGT GGCGCAGACC
CTGCACGACT GGCGCGACGC GTCGGCCGCG CCGATCGAGG GCGGCCTGCT GGCCGCGAGC
GCAGCCCTGC GGGCCGAACG CTTCGAGACG CCGGATGACG TCGTCATCCC GGCCGACCCG
GCCGAACCCG CCGCCTGA
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| Protein sequence | MMTPNPAPTQ GGADATRAAL SWAHTARFLT TASRLDQLPA HDLPEIAFVG RSNAGKSTAI
NTLAQQRQLA FASKKPGRTQ HINLFELGPK DAPSALWADL PGYGYAAVER AAKLRWQAVM
ADYLKMRRNL AGVVQMIDSR HGFTALDRQL LEFVGPRVVT GEVKLLVLLT KADKLNRKEA
SAALRSAQDF LADLSTDQSD LSVTLFSALK RQGVEDVAQT LHDWRDASAA PIEGGLLAAS
AALRAERFET PDDVVIPADP AEPAA
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