| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0369 |
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| Symbol | |
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| ID | 6163775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 403715 |
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| End bp | 405139 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663118 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001789409 |
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| Protein GI | 171057060 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000495456 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGCGGCC TGATGCTGCT GGCCGGCGGC ACCGGCGCAC CCTCCGCAGG CGCGCAGGTG
CCGCCGGCGG GCCAGCCGGG CACGCCGCTG CCCACGACGA TCCGCACCGC GCTGGCGCAG
GCCCAGCTGC CCGCCGACAG CCTCTACCTG TGGATCGCCC CGGCCGGCGG CGGCGAGGCG
CGCCTGAGCC ACCAGGCCGG GCAGCTGGCG CATCCGGCCT CGCTGATGAA GCTGGTGACC
TCGGCGGCGG CGCTGCAGCA GCTCGGCCGC AGCTTTCAAT GGCACACCAC CCTCCACCTC
GACGGCACGC CTCGGCAGGG CGTGCTGGCC GGCTCGCTCC ACATCAAGGG CGGCGGCGAC
CCGAAACTGG TGCCCGAGCG GCTGTGGCTG CTGCTGCGCC AGGTGCAGCA GCTCGGCATC
GACGAGATCC GCGGCGACAT CGTGCTCGAC CGCAGCGCAT ACGCGCTGCC CGAGATCGAC
CCGGCCGCCT TCGACGGCGA GCCGCTCAAG CCGTACAACG TGCGACCCGA CGCGCTGCTG
GTCAACTACA AGAGCATCAC GCTGGGCTTT CGTCCCGATC CGGCCCGCGG TGTCGCCAGC
GTCAGCGCCG AGCCGGCGCT CGCCGGCTGG ACACCGCCCG ACAGCGTGCG ACTGAGCGAC
GGGCCCTGCA ACGACTGGCG TGCCGGCCTG CAGGCGGATT TCAGTTCGCC GCAGCGCTGG
CGCCTGACCG GCAGCTACCC GCTGGCCTGT GGCGAACGCA ACTGGCCAAT CGCCTACAAC
GAGCCCGCCA GCTACGCCGC CCGCGTGATC GAGGCGCAAT GGCGCGCCCT CGGCGGGCGC
CTGCAGGGCC GCGTGCGCGA GGGCCTGGTG CCGGCCGGCC TGCCCGAGAC CGCCGCATTC
CTGTCGCCGC CGCTGGCCGA GGTCATGCGC GACATGAACC TGCACAGCAA CAACCAGATC
GCCCAGCAGA TGCTGCTGGC GCTGAGCCCG CAGCTGCCGG CCACGTTCGA GGCAGCACGC
CAGCCCGTGG CCAACCTGCT CGGCGCGGTC GGCTGCGACA GCGCCGAGCT GCGGCTCGAC
AACGGCTCGG GCCTGTCGCG CGACGAACGC ATCACGCCGC GCTGCCTGGG CCGCTGGCTG
CAGTGGTCGT GGCGCCAGCC GTGGATGCCC GACCTGCTCG GCTCGTTGCC GCTGGCGGGC
GAAGGCACGG CGCGCCGGGC GTTTTCAGTG GCCGGCCGGG CGCACCTGAA GACCGGCTCG
CTGGCCAACG TGGCCGCGAT CGCGGGCGTG GTGCACGGCG CGGACGGTCA GCGCCAGGTG
GTGGTCGCGA TGCTCAATCA CCCGCAGGCC AGCCGAGACG GCGCGCGCCA GGTGCTGGAT
GCGGTGCTGC GCTGGAGTGT CGAGGAACCC ACCGCGCCGC GATGA
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| Protein sequence | MCGLMLLAGG TGAPSAGAQV PPAGQPGTPL PTTIRTALAQ AQLPADSLYL WIAPAGGGEA
RLSHQAGQLA HPASLMKLVT SAAALQQLGR SFQWHTTLHL DGTPRQGVLA GSLHIKGGGD
PKLVPERLWL LLRQVQQLGI DEIRGDIVLD RSAYALPEID PAAFDGEPLK PYNVRPDALL
VNYKSITLGF RPDPARGVAS VSAEPALAGW TPPDSVRLSD GPCNDWRAGL QADFSSPQRW
RLTGSYPLAC GERNWPIAYN EPASYAARVI EAQWRALGGR LQGRVREGLV PAGLPETAAF
LSPPLAEVMR DMNLHSNNQI AQQMLLALSP QLPATFEAAR QPVANLLGAV GCDSAELRLD
NGSGLSRDER ITPRCLGRWL QWSWRQPWMP DLLGSLPLAG EGTARRAFSV AGRAHLKTGS
LANVAAIAGV VHGADGQRQV VVAMLNHPQA SRDGARQVLD AVLRWSVEEP TAPR
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