| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0367 |
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| Symbol | |
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| ID | 6162690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 401600 |
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| End bp | 402640 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641663116 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_001789407 |
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| Protein GI | 171057058 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000143554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGCAAC GCCTGCAGAC CCGCACCGAA GCCGAAACCG CCGCCGCGGT GGCCTTGGCC
GCGCAGCGCC TGGCCGCGGG CGAACTGGTC GCCTTTCCGA CCGAAACCGT CTACGGCCTG
GGCGCACGTG CCGACGACGC CGACGCGGTG GTCAAGATCT TCGCCGCCAA GGGCCGGCCG
AGCGATCACC CGCTGATCGT GCACGTCGCC GACGCGGCGT CGGCGCTGGC CTTCGCGGCC
GAGCTGCCGC CGGTGGCGCG CCGCCTGATG GACGCCTTCT GGCCCGGCCC GCTGAGCCTG
GTCGTGCCGC GCCGTGCCGA TGTGGCGGCG GCGGCGGCCG GCGGGCAATC GAGCGTCGGC
CTGCGCTGCC CGGCGCATCC GGTCGCGCAG GCCTTGCTGC GCGCCGCCGC TGCGGCCGGC
GTGCCGGGCG TGGCGGCACC GAGCGCCAAC CGCTTCGGCC GCGTCAGCCC GACCCGCGCC
GCCCACGTGA TCGACGAGTT CGCCGACCTG GCCGACCTGC CGGTGCTCGA CGGCGGCGAC
TGCGAGCTGG GCATCGAGTC GGCCATCGTC GACTGCACGC GCGGCTACCC GGTGCTGCTG
CGCCCCGGTT GCCTGGGCGC CGCGCAGATC GAGGCCGCGG CCGGCGAGCC GCTGCGCTCG
CGCGACGAGC AGGCGCCACG CGCATCGGGC ACGCTCGAAG CCCATTACGC GCCGCGCGCC
AAGGTGCGCC TGATGGATCG CCAGCAGATC CAGACCGCCC TGCAGGTGCT GCACGGCAGT
TTGCCGGCCG GTAAAGCTGC CAGGGCCGCC GCGCCGGGGC TGACACTGGC GGTATATTCG
CGCGGCCCGC GACCGGCCTC CCAGCCGGGC GTGCTCTGGC GCACGATGCC CGCTGATGCG
GGGGCCGCGG CGCACGAGTT GTTTGGTGTG CTGCGCGAGC TCGATGACGC GCTCGTGCAG
CTGATCTGGG TCGAGCAGCC GCCGTCCGAG CCCGCCTGGG ACGGCGTGCG CGATCGGCTC
CAGCGCGCCT CGGCGGCCTG A
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| Protein sequence | MPQRLQTRTE AETAAAVALA AQRLAAGELV AFPTETVYGL GARADDADAV VKIFAAKGRP
SDHPLIVHVA DAASALAFAA ELPPVARRLM DAFWPGPLSL VVPRRADVAA AAAGGQSSVG
LRCPAHPVAQ ALLRAAAAAG VPGVAAPSAN RFGRVSPTRA AHVIDEFADL ADLPVLDGGD
CELGIESAIV DCTRGYPVLL RPGCLGAAQI EAAAGEPLRS RDEQAPRASG TLEAHYAPRA
KVRLMDRQQI QTALQVLHGS LPAGKAARAA APGLTLAVYS RGPRPASQPG VLWRTMPADA
GAAAHELFGV LRELDDALVQ LIWVEQPPSE PAWDGVRDRL QRASAA
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