Gene Lcho_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0357 
Symbol 
ID6163660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp390738 
End bp391043 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content67% 
IMG OID641663106 
ProductDNA polymerase beta subunit 
Protein accessionYP_001789397 
Protein GI171057048 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0316504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTC CCGCCCTGAT CTCTCTCTCG GCCGGCGATC TGGCACCGAT CTGCCGGCGC 
CACGGCATCC ACCGGCTGGC CGTGTTCGGC TCGCGGCTGA AGGGCACGGC TCGCGCAGAC
AGCGATCTGG ATCTGCTGGT CGAATTCGAG CCGGGTCGCG TGCCCGGATT GCTGGGCCTG
AGTGCGATCG AGATCGAGTT GACCGAGGCG CTGGGCGTCA AGGTCGATCT GCGCACCGCG
CAGGACCTGA GTCCCTACTT CCGCGACGAA GTGCTCCGGC AGGCACAGGT GGCCTATGCA
GGCTGA
 
Protein sequence
MTVPALISLS AGDLAPICRR HGIHRLAVFG SRLKGTARAD SDLDLLVEFE PGRVPGLLGL 
SAIEIELTEA LGVKVDLRTA QDLSPYFRDE VLRQAQVAYA G