Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0356 |
Symbol | |
ID | 6162826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 390155 |
End bp | 390637 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641663105 |
Product | hypothetical protein |
Protein accession | YP_001789396 |
Protein GI | 171057047 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0198586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGTTTG TCGCAGTCCT CGTCGATTGC GACAACACAG CGCCGGATGT GCTGGAGCAC GCGTTACGCG TGGTCGCGCA ATTTGGACAG GTCGTGCTGC GGCGGGGGTA TAGCAGTCAC ACGACGCTCG CCAACAAATG GCAGGAAGCG CTGGTGCGGC TGGCGTTCAC GCCATGTCTG CAATTTCAAT ACGCGGCTGG CAAGAACACC TCGGACATTG CTTTGGCTCT GGACGCGTTG GAGGCGATGT TCGATCGCCG GTCAGACACC TTTTGTCTGG TGACCAGCGA TTCGGATTTC GCGTATCTGG GCGGGCTGGG CCAGTACCTG AAGCGGACCG ACCCGGCCTT TTCGCCGAAG ACCGACGGGC ACTGCGGACT GCTCGACATG CTGCGCACCT ACGACCTGCT GGTGGTGCAG CAGGAGCCCG GTGGGCACTG GACTGTGCGG CTCGAGCCCA GGGCGGAAGG CGAAGAGGGC TGA
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Protein sequence | MAFVAVLVDC DNTAPDVLEH ALRVVAQFGQ VVLRRGYSSH TTLANKWQEA LVRLAFTPCL QFQYAAGKNT SDIALALDAL EAMFDRRSDT FCLVTSDSDF AYLGGLGQYL KRTDPAFSPK TDGHCGLLDM LRTYDLLVVQ QEPGGHWTVR LEPRAEGEEG
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