| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0353 |
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| Symbol | |
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| ID | 6162823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 387589 |
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| End bp | 388368 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663102 |
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| Product | AzlC family protein |
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| Protein accession | YP_001789393 |
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| Protein GI | 171057044 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.16576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC TCGCCGCCCT GCGCCGCGCC TCCCGTGAAC TGCTTGCCGA CCCGCACTTG
CGGCGCGGCG CGGCCGACAT GCTGCCGATG CTGCCCGGCG TGGCCGCATG GGGTCTGGTG
ACCGGCGTGG CGATGGTCAA GAGCGGCCTG AGCGTGCCGC TGGCCCTGCT GATGACGCTG
ACCGTCTACG CCGGCACCTC GCAGCTCGCC GCCTTGCCGC TGATGGCGGT CGGCGCGCCG
ATGTGGGTGG TGCTGATGAC GGGTTTTGTC GTCAACCTGC GGTTCCTGAT CTACAGCGTG
CACTGGCGCT GGTACTTCGG CGGCCTGCCG CGGTCGACGC GCCTGTGGCT CGGCTACCTG
GCCGCCGACC TCAATTACGC CCTGTTCCTG AAGGCCTGGC CCGAGCCTCG GCCCGAACCC
GGCCAGGTGC CGTATTTCAT CGGCGGCGTG GCGGTGGTCT GGCTCGGCTG GCAGCTGCCG
AGCTTCGTCG GCATCGTCGC GGCCGACGTC ATCCCGCCGC AATGGGGGCT CGGATTTGCC
GGCACGCTGG CGCTGATCGG GCTGACCTGC ACGTTGCTGA TCGATCGCGC CACCTGGGTC
TGCGCCGCCG TCGCCGCATC GGCGGCCGTG GCGGCTTATG CCTTGCCGTA CAAGCTGCAC
ATCGTCGTCG CCGTGGCGGC GGCCGTGGCA GCCGGGCTGA TGATGGATGG CCTGGGCGGC
AAGGGCCGTG CGCTCGACGC CTTGCGCGCC TGGCGCGACC AGCGCGGGCG CGCCGGCTGA
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| Protein sequence | MPRLAALRRA SRELLADPHL RRGAADMLPM LPGVAAWGLV TGVAMVKSGL SVPLALLMTL
TVYAGTSQLA ALPLMAVGAP MWVVLMTGFV VNLRFLIYSV HWRWYFGGLP RSTRLWLGYL
AADLNYALFL KAWPEPRPEP GQVPYFIGGV AVVWLGWQLP SFVGIVAADV IPPQWGLGFA
GTLALIGLTC TLLIDRATWV CAAVAASAAV AAYALPYKLH IVVAVAAAVA AGLMMDGLGG
KGRALDALRA WRDQRGRAG
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