| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0350 |
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| Symbol | |
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| ID | 6160695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 385464 |
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| End bp | 385979 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641663099 |
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| Product | peptide deformylase |
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| Protein accession | YP_001789390 |
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| Protein GI | 171057041 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.100367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGT TACCCATCCT TCGCTACCCC GATCCGCGGC TCAACAAGAT CGCCAGGCCG
GTGATCCAAG TCGACGAGCG TATCCGCCAA CTGGTCTCCG ACATGTTCGA AACCATGTAC
GAGGCACGCG GAATCGGCTT GGCCGCCACA CAGGTCGACG TGCATGAGCG CGTGATCGTG
ATCGACGTCT CCGAAGAGCG CAACGACCCG CTGGTGCTGA TCAATCCGCG CATCGTCGCG
GCCAGCGAGG AAATGATGGT CGGCGACGAA GGCTGCCTGT CGGTGCCGAC CATCTACGAC
CGCGTCGAGC GGCATGCGCA GGTGCAGGTC GAGGCGCTCG ACCGCAACGG CCAGCGCTAC
GAGTTCGAGG CCGACGGCCT GCTGTCGGTG TGCGTGCAGC ACGAGATGGA TCACCTGCTC
GGCAAGGTGT TCGTCGAATA CCTGTCGCCG CTCAAGCGCA ATCGCATCCG CAGCAAGATG
ATCAAACGGG GTCGCGACGA CGGCGAGTCG GCATGA
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| Protein sequence | MSLLPILRYP DPRLNKIARP VIQVDERIRQ LVSDMFETMY EARGIGLAAT QVDVHERVIV
IDVSEERNDP LVLINPRIVA ASEEMMVGDE GCLSVPTIYD RVERHAQVQV EALDRNGQRY
EFEADGLLSV CVQHEMDHLL GKVFVEYLSP LKRNRIRSKM IKRGRDDGES A
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