| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0348 |
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| Symbol | |
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| ID | 6160693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 382955 |
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| End bp | 384094 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663097 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_001789388 |
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| Protein GI | 171057039 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.083083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCGCG ACGAACTGGC CGCCTGGCTG CAACTGCTCG AGACACCCGG CGTCGGCCGC
CAGAGTGCAC GCCGGCTGCT GGCGGCGTTC GGCAGCCCGC AAGCGGTGCT CTCGGCCAGC
GTGTCGGCCC GCGCCGGCGT GATCGACAAG GCGACCGCCG CCAAGCTCGA GCAGGCCCCC
GAGGGCCTGG CGTTGCTGGT GGAGCGCACC GCCGCGTGGC TGACTGGCGA ACCCGGGCGC
CGGATCCTGA CCCTGGCAGA CCCCGCCTAT CCCTCGATCT GGCTGAATCT GCCCGACCCG
CCGCTGCTGC TCTACGCACA GGGCAAGCTC GACTTGCTGC AACGCCCGGC GCTGGCGATC
GTCGGCAGCC GCCACCCGAC ACCCGAGGGC ACCGACAACG CCCGCGCGTT CGCGGCCTCG
CTCAGCCGGA CCGGCCTGAC CATCGTGTCC GGCCTGGCCG CGGGCATCGA CGGAGCCGCC
CACGAAGGCG CACTGGGCGG CACCGGCAGC ACGATCGCAC TGGTCGGCAC CGGGCTGGAT
CGGGTCTACC CGCGCGCCCA TCTGAAACTG GCGCGCGAGA TCGCCGATCG CGGCCTGCTG
CTGAGCGAGT TCTCCATCGG CACGCCACCG CTGGCGGCCC ACTTCCCGCT GCGCAACCGC
CTGATCGCCG GCCTGGGCAT GGGCACGCTG GTGGTCGAGG CGGCGCTGAA ATCGGGTTCG
CTGATCACGG CGCGGCTCGC ATCGGAATTC GGCCGCGAGG TGTTCGCCAT CCCCGGCTCG
ATCCACAACC CGCAGTCACG CGGCTGTCAC GCCCTGATCC GCCAGGGCGC CAAGCTGGTC
GAGAGCACGC AGGACGTGCT CGAAGAACTC CATCTGGCCG TCCCCGCAGC GGCAGTCAGC
ACCGGCCCTG CACACGCGGA ACCGGCCGCA GAGCAACCCG ACGACGCCAA CCCGCCCCCT
GATGACGTCG ACGACCCGAT CCTGCTGGCC CTGGGCTGGA GCGCCGCCAC CCTGGACGTG
CTGCAGGCGC GCACGGGCTG GGCGACCGCC GAACTCAACG TGCACCTGCT CGATCTCGAA
TTGAGCGGCC AGGTCGTGCG CCTGCCGGGG CAGCTGTTCC AGCGCCGGGC GCAGGCATGA
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| Protein sequence | MDRDELAAWL QLLETPGVGR QSARRLLAAF GSPQAVLSAS VSARAGVIDK ATAAKLEQAP
EGLALLVERT AAWLTGEPGR RILTLADPAY PSIWLNLPDP PLLLYAQGKL DLLQRPALAI
VGSRHPTPEG TDNARAFAAS LSRTGLTIVS GLAAGIDGAA HEGALGGTGS TIALVGTGLD
RVYPRAHLKL AREIADRGLL LSEFSIGTPP LAAHFPLRNR LIAGLGMGTL VVEAALKSGS
LITARLASEF GREVFAIPGS IHNPQSRGCH ALIRQGAKLV ESTQDVLEEL HLAVPAAAVS
TGPAHAEPAA EQPDDANPPP DDVDDPILLA LGWSAATLDV LQARTGWATA ELNVHLLDLE
LSGQVVRLPG QLFQRRAQA
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