| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0324 |
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| Symbol | |
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| ID | 6161448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 350044 |
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| End bp | 351537 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663073 |
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| Product | peptidase M20 |
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| Protein accession | YP_001789364 |
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| Protein GI | 171057015 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CCGAGCGCCA CCCCGTTCTC GACCCCTCCG CGCTCGGCGC CAGCCTGGCG
CAAACGTGGG ACGCCGACAT CCTGCCCGAG CTGCGCGACT ACATCGCCGT GCCCGCCAAG
AGCCCGATGT TCGATCCGCA GTGGCTCGAA AACGGCCACA TCGAGGCGGT GGTGCGGCGC
GCCGCGCAGT GGGTCGAGGC CCGCCGCGTC GCCGGCCTGA CGCTCGAAGT CATCCGCCTG
ACCGACGCCG CCGGCCAGCC GCGCACGCCG GTGGTCTTCT TCGAGGTGCC GGCCACCCGG
CCCGAGCCCG ACGCCGGCGC CGCGCCCACC GTGCTGATGT ACGGCCACCT CGACAAGCAG
CCCGAGTTCA ACGGCTGGCG CAGCGACCTC GGCCCCTGGA CGCCGGTGGT CGAGAACGAC
AAGCTTTACG GCCGCGGCGG CGCCGACGAC GGCTACGCGA TCTACGCCAG CGTGGCGGCG
ATCGAGGCGC TGCAGGCGCA GGGCGTGGCG CACCCGCGCA TCGTCGGCCT GATCGAGACC
TGCGAAGAAA GCGGCTCCTA CGACCTGCCG GCCTACGTGG ATGCGCTGCG CGAGCGCCTG
GGCAACGTCA GCCTGGTGGT CTGCCTCGAC TCCGGCGCGG GCAACTACGA GCAGCTCTGG
CTCACCACCT CGCTGCGCGG CAACGTCACC GGCACGCTCA AGGTCGAGGT GCTGACCGAA
GGCATCCACT CGGGCGATGC CAGCGGCGTG GTGCCGTCGA GCTTTCGCGT GCTGCGCCAG
CTGCTCGACC GGCTCGAAGA CAGCCGCACC GGCCGCCTGC TGCCCGCCAG CCTGCATTGC
GAGGTGCCGC CGCACCGCCT TGCGCAGGCG CGCGCCACCG CCGCGCTGCT GGGCGACGAG
GTCTGGCGGC GCCTGCCGTG GTCCTGCGGC GCCGACGGCG GCCCGACCCT GCCGACCACC
ACCGACCCGA CCGAGGTGCT GCTCAACCGC ACCTGGCGGC CGACGCTGTC GGTCACCGGC
GCCGAGGGGT TCCCGGCGGT GGCCCACGCC GGCAACGTGC TGCGACCCTA CAGCGCCTTC
AAGCTCAGCC TGCGCCTGCC GCCGCTGGTG GATGGGCCGA GCGCCGCGCT CGAACTCAAG
CGCCTGCTCG AAGCCGAGCC GCCCTACAAC GCCCGCGTCA CCTTCGTGCC CGACGGCCGC
GCCGGCGCCG AGGGCGCGAC CGGCTGGGAC GCGCCGCACC TGTCGCCGTG GCTCGAACGC
AGCCTCGACG CGGCCTCGAT CGCGCAGTTC GGCGCGCCGC TGGGCTACAT CGGCCAGGGC
GGCACGATCC CCTTGATGAA CATGCTCGAA CGCGGTTTCC CGCAGGCCCA GATGATGGTC
TGCGGCGTGC TCGGCCCCAA GAGCAACGCC CACGGCCCCA ACGAGTTCCT GCACCTGCCG
TACGCCAGGC GGCTCACCGC CGCCGTGGCG CAGGTGATCG CCGATCACCC GTGA
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| Protein sequence | MNAPERHPVL DPSALGASLA QTWDADILPE LRDYIAVPAK SPMFDPQWLE NGHIEAVVRR
AAQWVEARRV AGLTLEVIRL TDAAGQPRTP VVFFEVPATR PEPDAGAAPT VLMYGHLDKQ
PEFNGWRSDL GPWTPVVEND KLYGRGGADD GYAIYASVAA IEALQAQGVA HPRIVGLIET
CEESGSYDLP AYVDALRERL GNVSLVVCLD SGAGNYEQLW LTTSLRGNVT GTLKVEVLTE
GIHSGDASGV VPSSFRVLRQ LLDRLEDSRT GRLLPASLHC EVPPHRLAQA RATAALLGDE
VWRRLPWSCG ADGGPTLPTT TDPTEVLLNR TWRPTLSVTG AEGFPAVAHA GNVLRPYSAF
KLSLRLPPLV DGPSAALELK RLLEAEPPYN ARVTFVPDGR AGAEGATGWD APHLSPWLER
SLDAASIAQF GAPLGYIGQG GTIPLMNMLE RGFPQAQMMV CGVLGPKSNA HGPNEFLHLP
YARRLTAAVA QVIADHP
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