Gene Lcho_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0319 
Symbol 
ID6162543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp345806 
End bp346426 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID641663068 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001789359 
Protein GI171057010 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGA TCGCATCCCT CACCAGCCCC TACGCCCGCA AGGTGCGCAT CGTGCTGGCC 
GAGAAGAAGC TCGAGTACAA GCTCGAGCTT GACGACCCCT GGTCGGCGCA GCCGCAGGTC 
GCGTCGCACA ACCCGCTGGG CAAGGTGCCT TGCCTGTTGC TCGATGGCGG CGATGCGCTG 
TTCGATTCGC GCGTGATCGT CGAATACGTC GACACCCTGT CGCCGCTCGG CCGCCTGATC 
CCCGAGCGCG GCCGTGAGCG CGCCGAGGTG CGCACCTGGG AGGCGCTCGC CGATGGCGTG 
GTGGACGCCG CGGTGGCTGC GCGCCTCGAA GCCGTCTGGC CCGGTCGCAC CGATGCCGAA 
CGTTGCCAGG CCTGGATCGA CCGCCACATC GACAAGGTGC AGGCGGGCGT GGCGGCGATG 
GCCAGGGACC TGGGCGAACA GGCCTGGTGC TGTGGCCTGC ACCTGTCGCT GGCCGACATC 
GCGGTCGGCT GTGCCTTGTC GTACCTGGAT TTCCGTTTCC CGGACCTGGC CTGGCGCACG 
CAATATCCCA ATCTGGTGCG CCTGGTCGAC AAGCTCGGCC AGCGCCCCAG CTTCGTCCAG 
ACCCAGCCGC CGACCGCCTG A
 
Protein sequence
MRLIASLTSP YARKVRIVLA EKKLEYKLEL DDPWSAQPQV ASHNPLGKVP CLLLDGGDAL 
FDSRVIVEYV DTLSPLGRLI PERGRERAEV RTWEALADGV VDAAVAARLE AVWPGRTDAE 
RCQAWIDRHI DKVQAGVAAM ARDLGEQAWC CGLHLSLADI AVGCALSYLD FRFPDLAWRT 
QYPNLVRLVD KLGQRPSFVQ TQPPTA