Gene Lcho_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0315 
Symbol 
ID6162539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp340534 
End bp341169 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content68% 
IMG OID641663064 
Producturacil phosphoribosyltransferase 
Protein accessionYP_001789355 
Protein GI171057006 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0035] Uracil phosphoribosyltransferase 
TIGRFAM ID[TIGR01091] uracil phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGC CCCAGGTCCA CGTCGTCGGC CACCCGCTCG TCCAGCACAA GCTCACGCTG 
ATGCGCCAGA AGGACCTTTC CACCAGCAGC TTCCGGCGCC TGCTCGAGGA GATCAGCCTG 
TTGATGGCCT ACGAGGTCAC GCGCGACATG CCGACCCGGC TGATCGAGAT CGAGACCCCG 
CTCGAGACCA TGCGCAGCCC GGTGATCGAA GGCCGCAAGA CGGTGTTCGT GGTGATCATG 
CGCGCGGGCA GCGGTTTCCT CGACGGCATG CTGCAGGTGG TGCCGGGCGC GCGGGTGGGC 
CACATCGGCC TGTACCGCGA CCCGAAATCG CTGATCGCGG TCGAGTACTA CTTCAAGATG 
CCGCACGACA TGCCCGAGCG CGACGCCATC GTGCTCGATC CGATGCTGGC CACCGGCAAC 
TCGGCGGTGG CGGCGGTCGA GCGGCTCAAG GAGACGCGGC CGCGCTCGAT CCGTTTCGTC 
AGCCTGCTCT CAGCACCCGA GGGGCTCGCG CACTTCCACG CCCACCATCC CGACGTGCCG 
GTCTACACCG CGGCCGTCGA CCGGCAGCTC AACGAGCACG GGTACATCGT GCCGGGCCTG 
GGCGACGCCG GCGACCGGAT GTTCGGCACC AAGTGA
 
Protein sequence
MTSPQVHVVG HPLVQHKLTL MRQKDLSTSS FRRLLEEISL LMAYEVTRDM PTRLIEIETP 
LETMRSPVIE GRKTVFVVIM RAGSGFLDGM LQVVPGARVG HIGLYRDPKS LIAVEYYFKM 
PHDMPERDAI VLDPMLATGN SAVAAVERLK ETRPRSIRFV SLLSAPEGLA HFHAHHPDVP 
VYTAAVDRQL NEHGYIVPGL GDAGDRMFGT K