| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0305 |
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| Symbol | |
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| ID | 6163190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 330958 |
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| End bp | 331857 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663054 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_001789345 |
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| Protein GI | 171056996 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CCAGCCAACC TCGTTCCGAT GCCTCGCAAG CCGCGCTGCA GCAGCCACGC
CAGGTCGAAC GCCTGATCGT CGGGCAACCG ACCAGTGACG GCGCGGGCGT CAAGCTGACG
CGGGTCCTGA CGCAGAACCT GCAGCGCCGG CTCGATCCAT TTCTGATGCT CGACGCCTTC
GGCAGCGACG AGGCGGCGGA CTACATCGGC GGGTTTCCGG ATCATCCGCA CCGGGGCTTC
GAGACCGTCA CCTACATGAT CGCCGGGCGC ATGCGCCACC GCGATTCAGC CGGCAACGAA
GGCCTGCTGA GCAACGGCGG CGTTCAGTGG ATGACCGCCG GGCGGGGCGT GATCCACAGC
GAGTTGCCCG AGCAGGAAGA GGGCCGCATG GAAGGCTTCC AGCTCTGGCT CAACCTGGCG
GCGCGCGACA AGATGCGCCC GGCCTGGTAT CGCGACATCG GCAGCCAGCA GATCCCGGAG
CTTGAACTGC CGGGCGTGCG GGTCCGGGTG ATCGCCGGCC GCAGCCACGG TGTCGAGGGT
GCGATGCAGC GCGAGACCAC CGAGCCACTC TATCTCGATC TGCATCTGGA GCCAGGCGCG
AGCTTCGAGC AGCCGCTGGC GGCGCAACAC AACGCCTTCG TGTACGTCTA CCGCGGCCAA
CTGAGCATCG GCGCACCCGG CAGCACCACC GAAGTGCCGA TGCAGCGCAT GGCCATCCTC
GGCAATGCAG CCGACAGTGA TGGTGTGCGC CTGCAGGCCG GGCAAGAGCC GACTCGCGCC
CTGCTGATCG CCGGGCGGCC GCTGGGTGAA CCGATTGCGC AGTACGGCCC GTTCGTCATG
AACACGCAGC AGGAGATCTT TCAGGCTGTC GAGGATTTCC GCAACGGCCG GCTGGCCTGA
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| Protein sequence | MNLSSQPRSD ASQAALQQPR QVERLIVGQP TSDGAGVKLT RVLTQNLQRR LDPFLMLDAF
GSDEAADYIG GFPDHPHRGF ETVTYMIAGR MRHRDSAGNE GLLSNGGVQW MTAGRGVIHS
ELPEQEEGRM EGFQLWLNLA ARDKMRPAWY RDIGSQQIPE LELPGVRVRV IAGRSHGVEG
AMQRETTEPL YLDLHLEPGA SFEQPLAAQH NAFVYVYRGQ LSIGAPGSTT EVPMQRMAIL
GNAADSDGVR LQAGQEPTRA LLIAGRPLGE PIAQYGPFVM NTQQEIFQAV EDFRNGRLA
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