| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0299 |
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| Symbol | |
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| ID | 6161496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 316103 |
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| End bp | 317281 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663043 |
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| Product | glutamine--scyllo-inositol transaminase |
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| Protein accession | YP_001789339 |
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| Protein GI | 171056990 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGC CTTTTCTCCC CTTTGCACTG CCCGAGATCG GCGACGAAGA AATCGCCGAG
GTGGTCGACA CGCTGAAATC GGGCTGGGTC ACGACCGGCC CGAAGGCGCG CCGCTTCGAG
CAGGATTTCG CCGCCTTCCT GACCGAAGGG GCCGAGCCGG GCGCGGCGCC GATCGAGTGC
ATCGCCGTCA ACTCGGCCAC CGCCGGCCTG CACCTGGCGC TCGAGGCGCT GGGCATCGGC
GCTGGCGACG AGGTCATCAC GACCACGCAC ACCTTCACCG CCAGCGCCGA GGTGGCGCGC
TACCTGGGCG CCGACGTCAA GCTGGTCGAC ATCGACCCGG CGACGCTCAA CATTCACCCG
GCGGCGATCG AGGCCGCCAT CACGCCGCGT ACCAAGGCGA TCGTGCCGGT GCACTACGCC
GGGCTGGCGG CCGACATGCC GGCGATCCTC GACATCGCGC GCCGCCACGG CCTGAAGGTG
GTCGAGGACG CCGCGCACGC CTTGCCCAGC ACGCTGGGCG GGCGGCTGAT CGGCACGCTG
GGCAGCGACG TCACGGTCTT CAGCTTCTAC GCCAACAAGA CCATCACCAC CGGCGAGGGC
GGCATGATCG CCACCCGCGA CCCGGCGATC GCCGCGCGCT GCAAGGTGAT GCGCCTGCAC
GGCATCAACC GCGACGCCTT CGACCGCTTC ACCGCCAAGG TGCCGAGCTG GTACTACGAG
ATCGTGGCGC CGGGCTTCAA GTACAACCTG ACCGACATCG CCGCGGCGCT GGGCATCCAC
CAGCTGCGCC GCGCGCACGC CTTCCAGGAA AAGCGCGACG AGCTGGCCTC GCTCTACAAC
GAGCTGCTGG CCGAGCTGCC GCTGATCCTG CCGCCGATGC CGGCGCTGGG CGAGCTGCAC
TCGTGGCACC TGTACGTGGT GCGCCTGACC GACCACGCCC GCATCGGCCG CGACGCGCTG
ATCGAGCAGC TCTACGCCGC CGGCATCGGC TGCAGCGTGC ACTACATCCC GCTGCACCTG
CACCCGTACT GGCGCGAGCG TTACGCGCTG CGCGCCGAGG ACTTCCCGCA CAGCCAGCAC
GCCTACGAGC GCATGCTGAG CCTGCCGCTC TACACCCGCA TGACGGCCGA CGACGTGCAC
CGCGTGGTGC AGGCGTTGCG CACCGCGCTG CTGGGCTGA
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| Protein sequence | MSQPFLPFAL PEIGDEEIAE VVDTLKSGWV TTGPKARRFE QDFAAFLTEG AEPGAAPIEC
IAVNSATAGL HLALEALGIG AGDEVITTTH TFTASAEVAR YLGADVKLVD IDPATLNIHP
AAIEAAITPR TKAIVPVHYA GLAADMPAIL DIARRHGLKV VEDAAHALPS TLGGRLIGTL
GSDVTVFSFY ANKTITTGEG GMIATRDPAI AARCKVMRLH GINRDAFDRF TAKVPSWYYE
IVAPGFKYNL TDIAAALGIH QLRRAHAFQE KRDELASLYN ELLAELPLIL PPMPALGELH
SWHLYVVRLT DHARIGRDAL IEQLYAAGIG CSVHYIPLHL HPYWRERYAL RAEDFPHSQH
AYERMLSLPL YTRMTADDVH RVVQALRTAL LG
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