| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0297 |
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| Symbol | |
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| ID | 6161827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 313987 |
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| End bp | 315237 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663041 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001789337 |
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| Protein GI | 171056988 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC TTTATCTGAA TCACTACGCG GGCGCGCCGT CGCTCGGCAT GGAGTACCGG
CCCTACTACC TGGCGCGTGA ATGGGCGCGC ATGGGGCACC GGGTGCACAT GGTGGCCGCG
GGCTTCTCGC ATGTGCGTTC ACGCCAGCCG CTGCACGACG GGGCGCCGCT GCGCGCGCCG
CTGCAGCAGG CCATCGACGG CATCACCTAC CACTGGTTTC CGGCGCCGGC GTATCGCGGC
AACGGCGTCG GCCGGGTGCG CAACATCGGT GCCTTCCTGG GCCGGGTCTG GCGCGCCACC
GATGCGCTGA TCACGCAGAT CCGCCCGCAG GTGGTGATCG CATCGAGCAC CTATCCGCTC
GACATCTGGG TGGCGCGCCG CATCGCCCGC AAGGCCGGCG CCAAGCTGGT GTTCGAGGTG
CACGACCTGT GGCCGCTGTC GCCGATCGAA CTGGCCGGCA TGTCGCCGAA TCACCCGTTC
ATCCGCCTGT GCCAATGGGC CGAGGACACC GCCTACCGCG ATGCCGATGT CGTGGTGTCG
ATGCTGCCCA AGGTGCACGA CCACATGGCC AGCCACGGCC TCGACCTGGC CAAGCTGCAC
ATCGTGCCCA ACGGCATCGA CCCCGACGAA TGGGCCGGCA CCACCGCGTC ATTGCGCCAG
GACGTCGCCA CCGCCATCGT GCGCGCGCGC GCCGCCGGCC ACAGCGTGGT CTGCTACGCC
GGCTCGATGG GCTTGCCCAA CGCGCTCGAC ACCCTGCTCG ACGCCGCCGC GCTGCTGCGC
GACGCGCCGA TCACACTGCT GCTGGTGGGC GACGGCCACG AGCGCGAGCG CCTGACCGCG
CGCGTGCAGG CCGAGCACCT GAACCGCGTG CAGGTCTTCG CGCCGGTGCC GAAGGCGCAG
ATCCCGGCGC TGCTCGACGC CATCGACATC GCCTACATCG GCTGGCAGCG GGTGCCGATC
TACCGCTTCG GCATCGCGCC CAACAAGCTG ATGGACTACA TGATGGCCGG CTGCGCGGTG
CTGCATTCGG TCGAGGCCGG CAACGATCCG GTGGCCGACG CCGGCTGCGG CCTGACGGTG
CCGCCCGAGT CGCCGCAGGC GGTGGCCGAA GGGCTGCGTG CGCTGGCCGC GCTCAGCCGC
GAAGACCGCC ATCGCATGGG CGAGCGCGGC CGCGGCTACG TGCAGGCGCA TCACACCTAT
CCGGTGCTGG CGCGGCGGTT CCTGGCGGCG TGCGGCGCGC AGGAGGGCTG A
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| Protein sequence | MNILYLNHYA GAPSLGMEYR PYYLAREWAR MGHRVHMVAA GFSHVRSRQP LHDGAPLRAP
LQQAIDGITY HWFPAPAYRG NGVGRVRNIG AFLGRVWRAT DALITQIRPQ VVIASSTYPL
DIWVARRIAR KAGAKLVFEV HDLWPLSPIE LAGMSPNHPF IRLCQWAEDT AYRDADVVVS
MLPKVHDHMA SHGLDLAKLH IVPNGIDPDE WAGTTASLRQ DVATAIVRAR AAGHSVVCYA
GSMGLPNALD TLLDAAALLR DAPITLLLVG DGHERERLTA RVQAEHLNRV QVFAPVPKAQ
IPALLDAIDI AYIGWQRVPI YRFGIAPNKL MDYMMAGCAV LHSVEAGNDP VADAGCGLTV
PPESPQAVAE GLRALAALSR EDRHRMGERG RGYVQAHHTY PVLARRFLAA CGAQEG
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