| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0293 |
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| Symbol | |
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| ID | 6161823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 309732 |
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| End bp | 310880 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663037 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001789333 |
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| Protein GI | 171056984 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCA CCGACCTCAA AGCCCAATAC ACCGCCCTCA AGCCGCAGAT CGATGCCGGC
ATCCAGGCGG TGCTTGACCA CGGTCAATAC ATCATGGGCC CCGAGGTCAA GGCACTCGAA
ACCCGTCTCG CCGCGCGCAC CGGGGTCAAA CATTGCGTGA CGGTGGCCAG CGGCACCGAA
GCCTTGCTGA TCGCGCTGAT GGCGCTGGGT ATCAAGGCGG GCGACGAGGT GATCACCAGC
CCGTTCACCT TTGCCGCCAC CGGCGAGGTG ATCGCGTTGC TGGGCGCCAG GCCGGTGTTC
GTCGACATCG AGCCCGATAC CTGCAACCTC GACGCGACGC TGATCGAAGC GGCGATCACG
CCGCGTACGC GGGCCATCAT GCCGGTCAGC CTGTACGGCC AGGTGGCGGA CATGGATGCG
ATCAACACCG TCGCCGCCCG CCACGGCCTG CCGGTGATCG AGGATGCGGC GCAGAGCTAC
GGCGCCACGT ATCAAGGCAA GGCCAGCGGC GGGCTCAGCA CGATCGGCTG CACCAGCTTC
TTCCCGAGCA AGCCGCTGGG CTGCTACGGC GACGGCGGTG CGCTGTTCAC CGACGACGAC
GCGCTGGCGC AGGCCGCGCG CGAGATCCGC GTGCATGGCC AGAGCGCGCG CTACACGCAC
ACCCGCATCG GCGTCGGCGG ACGCATGGAC ACGCTGCAGT GCGCGGTGGT GCTGGCCAAG
CTCGAACGTT TCGACTGGGA GCTGGCGCGC CGGCGCGAGA TCGGGGCGCG TTATCACCGG
CTGCTGGCGC CGCTGACGGC ATTGCCAAAT GAGCGTGGAT TGGGGTTGAT CACGGTGCGG
CCGGATCGCG ACAGCGTCTG GGGCCAGTAC ACCGTGTTCG TGCCGCAGCG CGACAAGGTG
CAGGCCGCGC TGCAGGCCGC GGGCGTGCCG ACCGCCGTGC ATTACCCGAA GCCGTTGCAC
CATCAAGCCG CTTACGCCGA GTTCTGCTGC CCCGATTGCT GCCCCAACAG CATCGCCGCC
GCCGCGCGGG TGATGAGCCT GCCGATGAGC GCCGACCTGA GCGAGGAGGA CCAGGACGCC
GTGGTCGCCG CGCTGGCCGC TGCGCTCGAC GCCCTCGCGC GTGACGGCGC CGCGCCCGCC
GCACCTTGA
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| Protein sequence | MQFTDLKAQY TALKPQIDAG IQAVLDHGQY IMGPEVKALE TRLAARTGVK HCVTVASGTE
ALLIALMALG IKAGDEVITS PFTFAATGEV IALLGARPVF VDIEPDTCNL DATLIEAAIT
PRTRAIMPVS LYGQVADMDA INTVAARHGL PVIEDAAQSY GATYQGKASG GLSTIGCTSF
FPSKPLGCYG DGGALFTDDD ALAQAAREIR VHGQSARYTH TRIGVGGRMD TLQCAVVLAK
LERFDWELAR RREIGARYHR LLAPLTALPN ERGLGLITVR PDRDSVWGQY TVFVPQRDKV
QAALQAAGVP TAVHYPKPLH HQAAYAEFCC PDCCPNSIAA AARVMSLPMS ADLSEEDQDA
VVAALAAALD ALARDGAAPA AP
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