Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0289 |
Symbol | |
ID | 6160879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 306280 |
End bp | 307338 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641663033 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001789329 |
Protein GI | 171056980 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGCCG ATCTGCCCAT CACCGACCGA AAAATCAAGT TCGCGCTGGT GGGCTGCGGT CGCATCGCCA AGAATCACTT CGCCTCGCTG GCCCAGCACG GCGAGCGCGC CGAACTGGTC GCGGTGTGCG ACAACCAGCC CGCCGCACTC GCTGCCGCCG TCGCCGCCAC CGGCGCGCAA GGGTTCGCGT CGCTCGATGC GCTGCTCGCC GGATCGGACG CCGACATCGT CGTGCTGACC ACGCCCAGCG GCCTGCACTC GCGCCAGGCC ATCCGCGTCG CCGCCGCCGG CCGTCACGTG CTGAGCGAGA AGCCGATGGC GACCAAGTGG GACGAGGGCA TGGCGATGGT GCAGGCCTGC CGCGACGCGG GCGTCAAGCT GTTCGTCGTC AAGCAGAACC GCCTGAACGC GACCATGCAG CTGCTGAAGA AGGCGATCGA CGCCAAGCGC TTCGGCCGCA TCCACATGGT CACGGTCAAC GTCTTCTGGA CCCGCCCGCA AAGCTATTAC GACGAGGCGC CGTGGCGCGG CCGCTGGGAC ATGGACGGTG GTGCCTTCAT GAACCAGGCC AGCCACTACG TCGACATGGT CGACTGGCTG GTCGGCCCGG TCGACAACGT GCACGCCTAC ACCGCCACCC AGGCGCGCGA CATCGAGGCC GAAGACAGCG GCATCATGAG CCTGCGCCTG CGTGCCGGCG GCCTGGCGAG CATCGCGGTG ACGATGCTGA CCTACCCGAA GAACCTCGAA GGTTCGATCA CCGTGCTGGG CGAACGCGGC ACCGTGCGCA TCGGCGGCGT GGCGATCAAC GACATCCAGC ACTGGGAATT CGACGAGCCG CGCCCCGAAG ACGCCGAGGT CAAGGCGGCG AGCTACGCCA CCACCTCGGT CTACGGCTTC GGCCACCCGC TCTATTACGA CAATGTCATC AACACCCTGC GCGGCGAGGC GCATGCCGAG GTCGACGGCT ACTCCGGCCT GCGCTCGCTG GAGGTGCTGA TCGCCGGCTA CCGCAGCGCG CGTGACGGCG TGCGGGTCGG CCTGCCGCTG GTGTTCTGA
|
Protein sequence | MPADLPITDR KIKFALVGCG RIAKNHFASL AQHGERAELV AVCDNQPAAL AAAVAATGAQ GFASLDALLA GSDADIVVLT TPSGLHSRQA IRVAAAGRHV LSEKPMATKW DEGMAMVQAC RDAGVKLFVV KQNRLNATMQ LLKKAIDAKR FGRIHMVTVN VFWTRPQSYY DEAPWRGRWD MDGGAFMNQA SHYVDMVDWL VGPVDNVHAY TATQARDIEA EDSGIMSLRL RAGGLASIAV TMLTYPKNLE GSITVLGERG TVRIGGVAIN DIQHWEFDEP RPEDAEVKAA SYATTSVYGF GHPLYYDNVI NTLRGEAHAE VDGYSGLRSL EVLIAGYRSA RDGVRVGLPL VF
|
| |