| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0289 |
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| Symbol | |
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| ID | 6160879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 306280 |
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| End bp | 307338 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663033 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001789329 |
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| Protein GI | 171056980 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCG ATCTGCCCAT CACCGACCGA AAAATCAAGT TCGCGCTGGT GGGCTGCGGT
CGCATCGCCA AGAATCACTT CGCCTCGCTG GCCCAGCACG GCGAGCGCGC CGAACTGGTC
GCGGTGTGCG ACAACCAGCC CGCCGCACTC GCTGCCGCCG TCGCCGCCAC CGGCGCGCAA
GGGTTCGCGT CGCTCGATGC GCTGCTCGCC GGATCGGACG CCGACATCGT CGTGCTGACC
ACGCCCAGCG GCCTGCACTC GCGCCAGGCC ATCCGCGTCG CCGCCGCCGG CCGTCACGTG
CTGAGCGAGA AGCCGATGGC GACCAAGTGG GACGAGGGCA TGGCGATGGT GCAGGCCTGC
CGCGACGCGG GCGTCAAGCT GTTCGTCGTC AAGCAGAACC GCCTGAACGC GACCATGCAG
CTGCTGAAGA AGGCGATCGA CGCCAAGCGC TTCGGCCGCA TCCACATGGT CACGGTCAAC
GTCTTCTGGA CCCGCCCGCA AAGCTATTAC GACGAGGCGC CGTGGCGCGG CCGCTGGGAC
ATGGACGGTG GTGCCTTCAT GAACCAGGCC AGCCACTACG TCGACATGGT CGACTGGCTG
GTCGGCCCGG TCGACAACGT GCACGCCTAC ACCGCCACCC AGGCGCGCGA CATCGAGGCC
GAAGACAGCG GCATCATGAG CCTGCGCCTG CGTGCCGGCG GCCTGGCGAG CATCGCGGTG
ACGATGCTGA CCTACCCGAA GAACCTCGAA GGTTCGATCA CCGTGCTGGG CGAACGCGGC
ACCGTGCGCA TCGGCGGCGT GGCGATCAAC GACATCCAGC ACTGGGAATT CGACGAGCCG
CGCCCCGAAG ACGCCGAGGT CAAGGCGGCG AGCTACGCCA CCACCTCGGT CTACGGCTTC
GGCCACCCGC TCTATTACGA CAATGTCATC AACACCCTGC GCGGCGAGGC GCATGCCGAG
GTCGACGGCT ACTCCGGCCT GCGCTCGCTG GAGGTGCTGA TCGCCGGCTA CCGCAGCGCG
CGTGACGGCG TGCGGGTCGG CCTGCCGCTG GTGTTCTGA
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| Protein sequence | MPADLPITDR KIKFALVGCG RIAKNHFASL AQHGERAELV AVCDNQPAAL AAAVAATGAQ
GFASLDALLA GSDADIVVLT TPSGLHSRQA IRVAAAGRHV LSEKPMATKW DEGMAMVQAC
RDAGVKLFVV KQNRLNATMQ LLKKAIDAKR FGRIHMVTVN VFWTRPQSYY DEAPWRGRWD
MDGGAFMNQA SHYVDMVDWL VGPVDNVHAY TATQARDIEA EDSGIMSLRL RAGGLASIAV
TMLTYPKNLE GSITVLGERG TVRIGGVAIN DIQHWEFDEP RPEDAEVKAA SYATTSVYGF
GHPLYYDNVI NTLRGEAHAE VDGYSGLRSL EVLIAGYRSA RDGVRVGLPL VF
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