| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0283 |
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| Symbol | |
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| ID | 6160345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 299046 |
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| End bp | 302096 |
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| Gene Length | 3051 bp |
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| Protein Length | 1016 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663027 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789323 |
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| Protein GI | 171056974 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCAG TCGCTGCGCC TGACCTGCCG GCCTCGCCGT CCCCCACCCC GCCGCGCCGC
CTGCCGCGCT GGGCCCGCGT CTCGTTGTGG ACCGCCGGCA CGCTCGCCGT GCTGGCGCTG
GCCTGGACGC TGCTGATCGG CAGCTGGCTG CCCGGTTTCA TCAAGCCGCG CATCGAGGCC
GCCGGCAGCG ACGCGCTGGG CACGCCGATG GTGCTCGACC GCATCACCAT CGCGCCCTGG
AAGCTGGTGG TGCAGCTCGA CGGCCTGCGG GTGGGCGAGG CCGCCGCGCC GCTGTTCACG
CTGGGCAGCG CGCAGACGCA GCTCTCGTTG CAGAGCATCC GCCAGCGCGC CCCGGTGCTG
GCCAGCCTGA CGCTGCAGCA GCCGCGCGTG AACGTCGAGC GCCTGAGCGC CGAGCGCTTC
AACTTCAGCG CCGTGCTCGA CCACGTCAAG GCCCGCCAGG CCGCCCAGCC GCCCGCGCCG
CCGAGCCCCG AGCCGGCCCG CTTCGCGCTG CACAACATCC GGCTCGAAGG CGGCGCGCTG
CACTACCGCG ACGCGGTGCT GCAGACCGAG CACCACGTCG AGGCGCTGCG CATCGGCCTG
CCGTTCATCT CGTCGCTGCC CAGCGATGTC GAGACCGAGG TGCAGCCGCT GCTCGAAGCC
CGCATCGACG GCAGCGCCTT GCGGCTCGAC GGCCACGCCC GGCCGTTCGC GGCCGCCAAG
CCGGCCGAAC TGGCGCTCGA CCTGCAAGGC GTCAAGCTGG CCGACTGGGC CAGCCTGCTG
CGCGCAGTGC TGCCGGCCGA GTTCGCGCCG CAGGTGCTGC AAGGCCAGCT CGACACGAAG
CTGGCGATCA GCTTCGAGGC CCGACCCGAA CCGGCGCCGC CGAGCCTGCG CGTGCGCGGC
GAGCTGGCGA TCAGCGGCTT CGACCTGGCC GTGCCGACGC AGGGCGTGAC GGCGGCCTGG
CAGTCGTTCA GGCTCGAACA GATCGACCTC GCGCCGCTGG AGCGCCAGCA CGCGCTGGCC
CGGGTCGTGA TCGACGGGCT GAAGCTGCAG CTCGTGCGCC AGAAACCCGG CGCTGCGAAG
CCCGTGGCAT CGGCATCGGC GGCATCGGCC TCGACCGCGG CCGCCGCTGC GCCCGCGCCG
CTGCAATGGC AGCTCGGCGA ACTGCGCTGC AACGGCTGCG CGGTGACGCT GCGCGACACC
GGCATGACGC CGCCGGTGCA GCTCGACCTG GCCGACCTCC AGCTCGGGCT CAAGAACCTT
GCCGGCCCGG CCACGGCGCC GATCGGCTTC GACCTGGCCA CGCAGCTGAG CGCGGTGACC
GGCAGCGCCA AGCCGTCGCC CGGCACGCTG AAGCTGGCGG GCGAGGTCAG CGGTCTGCTG
CCCGGCCCGG CCGGTGCCGC GTTGCCGCTG GCGCTGAGCG CCGACGTCGG CCTCGACGCC
ATCGACCTGC GCGCCCTGCA GCCGTATCTG GCGCCGCACC TGAACCTCAC GCTGGTGGGC
GCCAAGGTCG GCACCGCCGG GCAGCTGAAA GTGAATGCGC CGGCCGGCGC CGGCTTCGCG
CCCGAGACGC TGCGGGTCGA CTACCGCGGC GCCGCCAGCC TGGCCGGCCT GCAGACGCAG
GACAGCGTCA ACGGCGCCGA CTTCGTCGGC TGGCGCCGGC TGGCCCTCGA CGGTCTGGCG
GTCGACTGGC AGGGCGGGCC GGGTGGCGGC GCGACCAACG CCGACCTCGG CCGCATCAGC
CTCGACGGCC TGCAGGCGCG CGTGATCCTG CACCCCGACG CGCACCTGAA CCTGGCCGAC
ATCGTCAAGC GCGAGCAGGG CGCGGCGCCG CAGTCGATCA CCACGCCGCA GACCACGCCG
CAGACGACCG CGCGCGCCAG CGCCGCCCCG GCCAGCGCGC CGGTGCCTGC GGCGGGCGGC
GCGGCCGCGC CGCTCAAGCT GCGCTGGCAG GCGATCACGC TGCGCGACGG CGCGGTGCAG
TTCACCGACA ACTTCGTCAA GCCCAACTAC ACGGCGCGCC TGACGCAGCT CAAGGGCGAG
GTCTCGGCGC TCAGCTCGGC GGCGCCCGAG CCGGCCCGGG TGTCGATCGC GGGCGCGCTC
GACGACGGCG CGCCGCTGCG CATCGCCGGG CGCCTGCACC CGCTGGGCGC GCGGCTCTAC
ACCGACATCG AGGCCTCGGC ACGTGGCATC GCGCTGACGC GCATGAGCAC CTACGCCGAG
CGCTACGCCG GCTACGCGAT CGAGAAGGGC TCGATGTCGG TCAACGTGCG CTACAAGATC
GAGCAGGGCA AGCTCGAAGC CGAGAACCAG CTCTTCCTCG ACCAGCTCAC CTTCGGCGAC
GCGGTCGACA GCCCCGACGC GCTCAAGCTG CCGGTGCGCC TGGCGGTGGC GCTGCTCAAG
AACAGCCGCG GCGAGATCGA CCTGCGCATG CCGGTGGCCG GCACGCTCGA CGACCCGCAG
TTCTCGATCG GCGGCGTGGT CTGGCAGGTG GTGCTCAACC TGCTGGAGCG CGCGGTGACG
GCGCCGTTCG CGATGCTGTT CGGCAGCGAC AGCAACGAGG CCAGCCACCT GCCGTTCGAG
CCAGGCTCGG CCGAACTCGA TGCCGCGGCA CGCGAGCGGC TCGACGCGAT GGCCCGGCGC
CTGATCGACA AACCGACGCT CAAGCTCGAA GCCACCGGTC GCGCCGACCC GCTGACCGAC
GGCGCCGCGC TGCAGTCGGC GTTTGCCGAG AAGGCCCGGG CCCAGGCCGC GGCCAGTGCC
GCCAGCGCAG CGGCCAAGGG CACGGCCCGT CCCGACATGC GCACCTTCCA GGTGCCGGCG
GCTGCCTCGG CGCCGGCGGC CGCCGCTTCG GCGCCCGTTC CGGCGCTCGA CGCCGCTGCG
CTGGACCGCG CCTTGCGCCA GCTGGCCGAC CAGCGCGCCG ACCGCGTGAT GGCCTATCTG
GCCACCCAGC TGCCGGCCGA GCGGGTGTTG CTGACGCGCT CGCAGCTCAC CTCCGAACGC
CCCGAAGGCG ATCAGGGCCC GACCAGCCGG GTGCAGTTCG AATTGCGCTG A
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| Protein sequence | MSPVAAPDLP ASPSPTPPRR LPRWARVSLW TAGTLAVLAL AWTLLIGSWL PGFIKPRIEA
AGSDALGTPM VLDRITIAPW KLVVQLDGLR VGEAAAPLFT LGSAQTQLSL QSIRQRAPVL
ASLTLQQPRV NVERLSAERF NFSAVLDHVK ARQAAQPPAP PSPEPARFAL HNIRLEGGAL
HYRDAVLQTE HHVEALRIGL PFISSLPSDV ETEVQPLLEA RIDGSALRLD GHARPFAAAK
PAELALDLQG VKLADWASLL RAVLPAEFAP QVLQGQLDTK LAISFEARPE PAPPSLRVRG
ELAISGFDLA VPTQGVTAAW QSFRLEQIDL APLERQHALA RVVIDGLKLQ LVRQKPGAAK
PVASASAASA STAAAAAPAP LQWQLGELRC NGCAVTLRDT GMTPPVQLDL ADLQLGLKNL
AGPATAPIGF DLATQLSAVT GSAKPSPGTL KLAGEVSGLL PGPAGAALPL ALSADVGLDA
IDLRALQPYL APHLNLTLVG AKVGTAGQLK VNAPAGAGFA PETLRVDYRG AASLAGLQTQ
DSVNGADFVG WRRLALDGLA VDWQGGPGGG ATNADLGRIS LDGLQARVIL HPDAHLNLAD
IVKREQGAAP QSITTPQTTP QTTARASAAP ASAPVPAAGG AAAPLKLRWQ AITLRDGAVQ
FTDNFVKPNY TARLTQLKGE VSALSSAAPE PARVSIAGAL DDGAPLRIAG RLHPLGARLY
TDIEASARGI ALTRMSTYAE RYAGYAIEKG SMSVNVRYKI EQGKLEAENQ LFLDQLTFGD
AVDSPDALKL PVRLAVALLK NSRGEIDLRM PVAGTLDDPQ FSIGGVVWQV VLNLLERAVT
APFAMLFGSD SNEASHLPFE PGSAELDAAA RERLDAMARR LIDKPTLKLE ATGRADPLTD
GAALQSAFAE KARAQAAASA ASAAAKGTAR PDMRTFQVPA AASAPAAAAS APVPALDAAA
LDRALRQLAD QRADRVMAYL ATQLPAERVL LTRSQLTSER PEGDQGPTSR VQFELR
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