Gene Lcho_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0270 
Symbol 
ID6160540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp285092 
End bp285964 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content71% 
IMG OID641663014 
ProductMOSC domain-containing protein 
Protein accessionYP_001789310 
Protein GI171056961 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.184524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACT TCATTCCCGA CGACGGCAGC AGCCCGCTGC GCATCGCCAG CCTGCACATC 
TACCCGGTCA AGTCGTGCAC GGGCATCACG CTCGACGAGG CGCTGCTGGC CGACACCGGC
CTCGACCGCG ATCGCCAGTG GATGGTGGTC GATCCGCAAG GCCTGTTCGT CAGCCAGCGC
GAGACCCCCC GCATGGCGCT GATCCAGGTC AGCCTCAAGA ACGGCGAGGC GGTGCTGCGC
GCGCCCGGCA TGCTGGCGCT GCACCTGCCG CTCGACGCCG CCGAGGATCC GATCGACGTG
CAGGTGTGGG ATGACCGCCT GAGCGCCTGC AGCATGGGCC GGACCGCCGA CCAGTGGCTG
AGCGATTTCC TCGGCCGGCC GCTGCGCCTG GCGCGCTTCG ACCCCGAGCA GCAGCGCTAC
TCGAGCCGGC GCTGGACCGG CGACGTCGCC GCGGCCAACC TGTTTTCCGA CGGTTACCCG
ATCCTCGTCA CCGCCACCGC GTCGCTGGCC GACCTGAACC GGCGCCTCGC CGAGCGCGGC
CAGCCGGCGG TGACGATGGC GCGCTTTCGG CCCAACCTGG TGCTCGACGG CATCGACGCC
TATGCCGAGG ACCATCTCGA CGAGCTGCAG TTCGACACCC CCGACGGCCC GGTCACGCTG
CGGCTGGTCA AGCCCTGCCC GCGCTGCCCG ATCCCGAACA CCGACCCGCT GACCGCCGAA
CGCGGCGACG AGCCCGGCCT GACGCTGGCC GGCTACCGCG CCGACGCGCG GCTCGACGGT
GCTGTCACCT TCGGCATGAA CGCGGTGATC GTCGCGGGCA TCGACTGCCG CCTGAAGGTC
GGCCAAAAAG GCCGCGGCAC GGTCAGGTAC TGA
 
Protein sequence
MSDFIPDDGS SPLRIASLHI YPVKSCTGIT LDEALLADTG LDRDRQWMVV DPQGLFVSQR 
ETPRMALIQV SLKNGEAVLR APGMLALHLP LDAAEDPIDV QVWDDRLSAC SMGRTADQWL
SDFLGRPLRL ARFDPEQQRY SSRRWTGDVA AANLFSDGYP ILVTATASLA DLNRRLAERG
QPAVTMARFR PNLVLDGIDA YAEDHLDELQ FDTPDGPVTL RLVKPCPRCP IPNTDPLTAE
RGDEPGLTLA GYRADARLDG AVTFGMNAVI VAGIDCRLKV GQKGRGTVRY