| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0269 |
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| Symbol | |
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| ID | 6160539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 284699 |
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| End bp | 284935 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641663013 |
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| Product | tail collar domain-containing protein |
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| Protein accession | YP_001789309 |
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| Protein GI | 171056960 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4675] Microcystin-dependent protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0994346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCCCA TTCTCGGCAT GATCGCGTTG TTCTCGTTCC CGTTCCAGAT GGAGGGCTGG
GCCCCGTGTG ACGGGCGGCT GTTGCCGATC ATGCAGTACC AGGCGCTGTA TTCGCTGATG
GGAACGACCT ATGGCGGCGA CGGCCAGTCC ACCTTCGGGA TCCCCAAGAT GGCCGCCCCT
GCACAAGGCA TGAGCTACCA GATCGCGCTC AACGGCGTCT ACCCCCAACG CGCCTGA
|
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| Protein sequence | MDPILGMIAL FSFPFQMEGW APCDGRLLPI MQYQALYSLM GTTYGGDGQS TFGIPKMAAP
AQGMSYQIAL NGVYPQRA
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