Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0268 |
Symbol | |
ID | 6160513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 283501 |
End bp | 284640 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641663012 |
Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
Protein accession | YP_001789308 |
Protein GI | 171056959 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0654984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCA TGAACACGAG TGCAACGCGC CCCCTCGATG TCTGCATCCG CGGCGGCGGA CCGGTCGGTG CCAGCCTGGC GCTGGCGCTG AGCCGGCTGG GCTGGCAGGT CGGGCTGGTG ACGCCCCCGG CGCCCACGCG CAGCGGCCCC GACGTGCGCA CCTACGCGCT CAACGCCGGC TCGGCGCAAC TGCTGCGCGA GCTGCGCGTG TGGGACGCCC TGCCGGCCGA CGCCATCACC GCCGTCGACG AGATGCAGAT CGACGGCGAT GCCGGCGGCC ACCTCGAATT CAGCGCCTGG CAGCAGACGG TCGACGCGCT GGCCTGGATC GTCGACGCCG CCGCGCTCGA CGCCGCGCTG GCCGAGGCGC TGCGTTACGC GCCGCACGTG CAGCGGCTCG AGCAGAACGC GCCGGCCGCG CTGCTGGCGG TCTGCGAGGG CCGCGATTCG GCCACCCGCG AGGCGCTGGG CGCCGTCTTC GAGCGCTGGC CCTACGGCCA CCACGCGGTG GCGGCGCGGC TGGTGGCCGA TGCGCCGCAC CACGGCATCG CCCGCCAGTG GTTCCGCAGC CCGGACATCC TGGCGCTGCT GCCGTTCGAC CGCCCGCAGA TCGGCCATTC CTACGGCCTG GTGTGGTCGC TGCCCGAGGC CCGTGCCGCC GAGCTGATGG CCTGCACGCC GGCCGATTTC GAGGCGGCGC TGGACGAGGC CAGCGGCGGC GCGGCCGGCA CGCTGCGGCT GTCGGGCGAA CGCGCCGGCT GGCCGCTGAT GCTCGCGCGT GCACAGCGCT GGATCGGCCC GGGCTGGGCG CTGCTGGGCG ACGCCGCGCA CGCGGTGCAT CCGCTGTCGG GCCAGGGCCT GAACCTCGGC CTGGCCGACG TGCGCTGCCT CGTGCGCGTG CTGCACGACG CGCGCCGCAC GAGCCCCTGG CGCAGCGCCG GCGACGAGCG CACGCTGCGC CGCTACGCCC GCGAACGCCT GGCGCCCACG CGCATGATGG GCACGCTGAC CGACGGCCTG CTGCAGCTGT TCGCCGCCCC GCCCGGCCCG CTGAAGGACC TGCGCAACCA CGGCCTGACC CTGGTCGACC GCCTGAGCCC CGTCAAGCGC TGGCTGGCCG CGCGCGCGCT CGACACCTGA
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Protein sequence | MAAMNTSATR PLDVCIRGGG PVGASLALAL SRLGWQVGLV TPPAPTRSGP DVRTYALNAG SAQLLRELRV WDALPADAIT AVDEMQIDGD AGGHLEFSAW QQTVDALAWI VDAAALDAAL AEALRYAPHV QRLEQNAPAA LLAVCEGRDS ATREALGAVF ERWPYGHHAV AARLVADAPH HGIARQWFRS PDILALLPFD RPQIGHSYGL VWSLPEARAA ELMACTPADF EAALDEASGG AAGTLRLSGE RAGWPLMLAR AQRWIGPGWA LLGDAAHAVH PLSGQGLNLG LADVRCLVRV LHDARRTSPW RSAGDERTLR RYARERLAPT RMMGTLTDGL LQLFAAPPGP LKDLRNHGLT LVDRLSPVKR WLAARALDT
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