Gene Lcho_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0268 
Symbol 
ID6160513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp283501 
End bp284640 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content76% 
IMG OID641663012 
ProductUbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 
Protein accessionYP_001789308 
Protein GI171056959 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0654984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA TGAACACGAG TGCAACGCGC CCCCTCGATG TCTGCATCCG CGGCGGCGGA 
CCGGTCGGTG CCAGCCTGGC GCTGGCGCTG AGCCGGCTGG GCTGGCAGGT CGGGCTGGTG
ACGCCCCCGG CGCCCACGCG CAGCGGCCCC GACGTGCGCA CCTACGCGCT CAACGCCGGC
TCGGCGCAAC TGCTGCGCGA GCTGCGCGTG TGGGACGCCC TGCCGGCCGA CGCCATCACC
GCCGTCGACG AGATGCAGAT CGACGGCGAT GCCGGCGGCC ACCTCGAATT CAGCGCCTGG
CAGCAGACGG TCGACGCGCT GGCCTGGATC GTCGACGCCG CCGCGCTCGA CGCCGCGCTG
GCCGAGGCGC TGCGTTACGC GCCGCACGTG CAGCGGCTCG AGCAGAACGC GCCGGCCGCG
CTGCTGGCGG TCTGCGAGGG CCGCGATTCG GCCACCCGCG AGGCGCTGGG CGCCGTCTTC
GAGCGCTGGC CCTACGGCCA CCACGCGGTG GCGGCGCGGC TGGTGGCCGA TGCGCCGCAC
CACGGCATCG CCCGCCAGTG GTTCCGCAGC CCGGACATCC TGGCGCTGCT GCCGTTCGAC
CGCCCGCAGA TCGGCCATTC CTACGGCCTG GTGTGGTCGC TGCCCGAGGC CCGTGCCGCC
GAGCTGATGG CCTGCACGCC GGCCGATTTC GAGGCGGCGC TGGACGAGGC CAGCGGCGGC
GCGGCCGGCA CGCTGCGGCT GTCGGGCGAA CGCGCCGGCT GGCCGCTGAT GCTCGCGCGT
GCACAGCGCT GGATCGGCCC GGGCTGGGCG CTGCTGGGCG ACGCCGCGCA CGCGGTGCAT
CCGCTGTCGG GCCAGGGCCT GAACCTCGGC CTGGCCGACG TGCGCTGCCT CGTGCGCGTG
CTGCACGACG CGCGCCGCAC GAGCCCCTGG CGCAGCGCCG GCGACGAGCG CACGCTGCGC
CGCTACGCCC GCGAACGCCT GGCGCCCACG CGCATGATGG GCACGCTGAC CGACGGCCTG
CTGCAGCTGT TCGCCGCCCC GCCCGGCCCG CTGAAGGACC TGCGCAACCA CGGCCTGACC
CTGGTCGACC GCCTGAGCCC CGTCAAGCGC TGGCTGGCCG CGCGCGCGCT CGACACCTGA
 
Protein sequence
MAAMNTSATR PLDVCIRGGG PVGASLALAL SRLGWQVGLV TPPAPTRSGP DVRTYALNAG 
SAQLLRELRV WDALPADAIT AVDEMQIDGD AGGHLEFSAW QQTVDALAWI VDAAALDAAL
AEALRYAPHV QRLEQNAPAA LLAVCEGRDS ATREALGAVF ERWPYGHHAV AARLVADAPH
HGIARQWFRS PDILALLPFD RPQIGHSYGL VWSLPEARAA ELMACTPADF EAALDEASGG
AAGTLRLSGE RAGWPLMLAR AQRWIGPGWA LLGDAAHAVH PLSGQGLNLG LADVRCLVRV
LHDARRTSPW RSAGDERTLR RYARERLAPT RMMGTLTDGL LQLFAAPPGP LKDLRNHGLT
LVDRLSPVKR WLAARALDT