Gene Lcho_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0262 
Symbol 
ID6160581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp277484 
End bp278080 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content74% 
IMG OID641663006 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001789302 
Protein GI171056953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0364941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG ACGCGCGACT GGCCGAGCTG GCGCAGATCG AGTCCGCCGT GTGGGCCGAG 
CTGGAGCGCG CCGTGCACAG TCGCTTCACC GGCAGCGTGG CGCCGCACGA ATGGCGCCGG 
GCCGTTCTGG CGACCCAGGA TGCCGACGGC CCGCAGGCGC GCAGCGTGGT GCTGCGCGAC 
CTGCTGCTCG ACAGCCGCGA ACTGGTCTTC TACGCCGACG CGCGTTCGCC CAAGGTGGCG 
CAGCTGCGGC GCGATCCACG CGCCGTGCTG CTGTGCTGGA GCTCAACGCT GGGCTGGCAG 
CTGCGGCTGC GCTGCCACAT CGAGGTCGAG ACCAGCGGCC TGGACGTGAC CGCACGCTGG 
GCCCACATCC GCAACCGCCC GGCCGCGCAC GACTACCTGT CGCCGCTGGC CCCCGGCACG 
CCGATGCCCG ACGGCCACGG CGGCCTGGTG GTGACGCCGC TGCCGCCCGA ACGCCTGCGC 
GAGACCTTCG CGGTGCTGTC GGCGCGGGTC GAGGCGATCG ACTGGCTGGA GCTGCACGCG 
CGCGGCCAGC GGCGCGCCGT GTTCGACGCC CAGGGCGCGC GCTGGCTGAC GCCCTGA
 
Protein sequence
MTEDARLAEL AQIESAVWAE LERAVHSRFT GSVAPHEWRR AVLATQDADG PQARSVVLRD 
LLLDSRELVF YADARSPKVA QLRRDPRAVL LCWSSTLGWQ LRLRCHIEVE TSGLDVTARW 
AHIRNRPAAH DYLSPLAPGT PMPDGHGGLV VTPLPPERLR ETFAVLSARV EAIDWLELHA 
RGQRRAVFDA QGARWLTP