| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0259 |
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| Symbol | |
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| ID | 6160578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 274065 |
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| End bp | 275648 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663003 |
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| Product | alkyl hydroperoxide reductase, F subunit |
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| Protein accession | YP_001789299 |
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| Protein GI | 171056950 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00384538 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGGACC AAGCCCTCAA GACCCAATTG AAGAGCTACC TCGAGCGCCT GCAACGGCCG
ATCGAGCTGG TGGCGTCTCT CGACGACAGC GCCAAGAGCG CCGAACTGCG CGGCCTGCTG
CAGGACATCG CCGGCCTGTC GCCCCAGGTG AGCCTGGTCG AGCGCGACGA CGGCCAGCGC
ACGCCCTCGT TCACGATCGG TGCGGCCGGC GCCGACGAGG CCGCCCGCAT CCGCTTTGCC
GGCATCCCGC TGGGCCACGA GTTCACCTCG CTGGTGCTGG CGCTGCTGCA GACCGGCGGC
CACCCGCCCA AGGTCGAGGC CGGCGTGATC GAGCAGATCC GCGGCCTGGA CGCCGACCTC
AGCTTCGAGG TCTACATGTC CCTGACCTGC CACAACTGCC CGGACGTGGT GCAGGCGCTC
AACCTGATGG CGGTGCTCAA CCCCGGCGTC AAGGTGACGA CGATCGACGG CGCGCTGTTC
CAGGACGAGA TCGCGCAGCG CCAGATCATG GCGGTGCCCA CCGTGTTCCT GAACGGCCAG
GAGTTCGGCG CCGGCCGCAT GACGGTCGAA GACATCCTCG CCAAGGTCGA CACCGGCGCG
GCCGCGCGTG ATGCGGCTCG GCTGGCCAAG CAGGCGGCCT ACGACATGCT GATCGTCGGC
GGCGGCCCGG CCGGCGCGGC GGCGGCGGTG TACGCGGCGC GCAAGGGCAT CCGCACGGGC
GTGGTGGCCG AGCGTTTCGG CGGCCAGACG CTCGACACGA TGGCGATCGA GAACTTCATC
TCGGTCAAGG AAACCGACGG GCCGAAGTTC GCGGTGGCGC TGGAGCAGCA CGTCAAGCAG
TACGACGTCG ACATCATGAA CGCGCAGCGC GCCGTCAAGC TGACCCCGGC CACCGAGCCG
GGAGGGCTGG CCGAGCTGGA ACTGGCCAAC GGCGCGGTGC TGAAGGCGCG CAGCGTGATC
CTGAGCACCG GCGCGCGCTG GCGCAACGTC AACGTGCCCG GCGAGGCCGA GTACAAGAAC
AAGGGCGTGG CCTACTGCCC GCACTGCGAC GGCCCGCTGT TCAAGGGCAA GCGCGTGGCG
GTGATCGGCG GCGGCAACTC GGGCGTCGAG GCGGCGATCG ACCTGGCCGG CATCGTCAAG
CACGTGACGT TGATCGAATT CGCCGACGCG CTGCGCGCCG ACGCGGTGCT GGTGGCCAAG
CTCAAGAGCC TGCCCAACGT GGCGATCCAC ACCAGCGCGC AGACCACCGA GATCCACGGC
GACGGCCAGA AGGTCAACGG CCTGAGCTAC ACCGACCGTG TCAGCGGCGC GGGCCATCGG
ATCGATCTCG AAGGCGTGTT CGTGCAGATC GGCCTGGTGC CCAACACCGA GTGGCTCAAG
GGCACGATCG AGCTCAGCCG CCACGGCGAG ATCATCATCG ACGCCCGCGG CCAGACCAAT
GTGCCCGGCA TCTACGCCGC CGGCGACGTG ACGACGGTGC CGTTCAAGCA GATCGTGATC
GCGGTGGGCG AGGGCGCGAA GGCCGCACTC GGCGCCTTCG ACCACCTGAT GCGCACGCCG
GTGGTGGCGG CCGAGACGGC CTGA
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| Protein sequence | MLDQALKTQL KSYLERLQRP IELVASLDDS AKSAELRGLL QDIAGLSPQV SLVERDDGQR
TPSFTIGAAG ADEAARIRFA GIPLGHEFTS LVLALLQTGG HPPKVEAGVI EQIRGLDADL
SFEVYMSLTC HNCPDVVQAL NLMAVLNPGV KVTTIDGALF QDEIAQRQIM AVPTVFLNGQ
EFGAGRMTVE DILAKVDTGA AARDAARLAK QAAYDMLIVG GGPAGAAAAV YAARKGIRTG
VVAERFGGQT LDTMAIENFI SVKETDGPKF AVALEQHVKQ YDVDIMNAQR AVKLTPATEP
GGLAELELAN GAVLKARSVI LSTGARWRNV NVPGEAEYKN KGVAYCPHCD GPLFKGKRVA
VIGGGNSGVE AAIDLAGIVK HVTLIEFADA LRADAVLVAK LKSLPNVAIH TSAQTTEIHG
DGQKVNGLSY TDRVSGAGHR IDLEGVFVQI GLVPNTEWLK GTIELSRHGE IIIDARGQTN
VPGIYAAGDV TTVPFKQIVI AVGEGAKAAL GAFDHLMRTP VVAAETA
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