| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0254 |
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| Symbol | |
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| ID | 6160530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 270367 |
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| End bp | 271176 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641662998 |
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| Product | cytochrome c oxidase subunit II |
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| Protein accession | YP_001789294 |
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| Protein GI | 171056945 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00721127 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCTGT CCATCGCCCT GATCGTCATC GTCGTCGGCT CGGTGCTGTT CCACCTGCTG
AGCCCGTGGT GGACGCAGCC GCTGGCGTCG AACTGGCAGC GCATGGACGA CACGCTGACC
ATCACGCTGC TGATCACCGG CGCGTTTTTC GTGGTGATCC ACGCGGTGGT CATCTACGCC
ATCCTGCGCT GGCGCCACCG CGCCGGCCGG GGCCAGGCGC GCGCCGCCTA CACGCCCGAC
GACCACCGGC TCGAACGCTG GCTGATCGGC ATCACCACGG TCGGCATCGT CGCGCTGCTG
GCGCCCGGCC TGGTGGTCTA TGCCGACTAC GTGCGCCCAC CCGCCGATGC GCTCAAGGTC
GAGGTGGTCG GCCAGCAGTG GCGCTGGCGT TATCGGTTTG CAGGCGAGGA CGGCCTGCTC
GGCCGCAGCG ACATCCGCCA CGTCAGCGCC GACAACCCCT TCGGCCTCGA CCCCGCCGAT
GCACGCGGCC ACGGCGACGT GCTGATCGAC GACAACGAGC TGCACCTGCC GCTGGCGCGC
CCGGTGCAGC TGCAACTGCG CTCCAACGAC GTGCTGCACG ACTTCTTCGT GCCGCCGTTT
CGCGCCCGCA TGAACATCGT GCCGGGCAGC GTCACCACCT TCTGGTTCAC GCCCACGCAG
ACCGGGCGTT TCGAGCTGAT GTGCGCGCAG CTGTGCGGCA TCGGCCACCA CCTGATGCGC
GGCGTCGTGG TGGTCGAGGA CGAGGCGGCC TTCCAGGCCT GGCTGGCTGC GCAGCCCCGC
TACGCCGCAG CCACCGGCGG CAAGCCCTGA
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| Protein sequence | MALSIALIVI VVGSVLFHLL SPWWTQPLAS NWQRMDDTLT ITLLITGAFF VVIHAVVIYA
ILRWRHRAGR GQARAAYTPD DHRLERWLIG ITTVGIVALL APGLVVYADY VRPPADALKV
EVVGQQWRWR YRFAGEDGLL GRSDIRHVSA DNPFGLDPAD ARGHGDVLID DNELHLPLAR
PVQLQLRSND VLHDFFVPPF RARMNIVPGS VTTFWFTPTQ TGRFELMCAQ LCGIGHHLMR
GVVVVEDEAA FQAWLAAQPR YAAATGGKP
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