Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0247 |
Symbol | |
ID | 6160535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 264671 |
End bp | 264967 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641662991 |
Product | coenzyme PQQ synthesis D |
Protein accession | YP_001789287 |
Protein GI | 171056938 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00271715 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGCGC CCACCGCTGA ACGGGCCGCG CTCACCGACG ACAGCGTGCC GAGCGTGGCG CGCGGGTTCC GGCTGCAATG GGAAGAAGCG CAAGGCAACC ACGTGCTGCT CTACCCCGAG GGCATGGTCA AGCTCAACCG CAGCGCGGGC GAGATCCTGA CGCGCTGCGA CGGCGTCGCG ACGGTGGCTC AGATCGTGAG CCAGCTCGAA GCGGCGTTCG GTGCCAGCGG GCTGCGTGCC GATGTCGAGG CCTTCCTGAT GATGGCGCGC GAGCAGCGTT GGGTGACGTG GGCATGA
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Protein sequence | MNAPTAERAA LTDDSVPSVA RGFRLQWEEA QGNHVLLYPE GMVKLNRSAG EILTRCDGVA TVAQIVSQLE AAFGASGLRA DVEAFLMMAR EQRWVTWA
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