Gene Lcho_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0247 
Symbol 
ID6160535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp264671 
End bp264967 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content69% 
IMG OID641662991 
Productcoenzyme PQQ synthesis D 
Protein accessionYP_001789287 
Protein GI171056938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00271715 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCGC CCACCGCTGA ACGGGCCGCG CTCACCGACG ACAGCGTGCC GAGCGTGGCG 
CGCGGGTTCC GGCTGCAATG GGAAGAAGCG CAAGGCAACC ACGTGCTGCT CTACCCCGAG
GGCATGGTCA AGCTCAACCG CAGCGCGGGC GAGATCCTGA CGCGCTGCGA CGGCGTCGCG
ACGGTGGCTC AGATCGTGAG CCAGCTCGAA GCGGCGTTCG GTGCCAGCGG GCTGCGTGCC
GATGTCGAGG CCTTCCTGAT GATGGCGCGC GAGCAGCGTT GGGTGACGTG GGCATGA
 
Protein sequence
MNAPTAERAA LTDDSVPSVA RGFRLQWEEA QGNHVLLYPE GMVKLNRSAG EILTRCDGVA 
TVAQIVSQLE AAFGASGLRA DVEAFLMMAR EQRWVTWA