| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0231 |
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| Symbol | |
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| ID | 6162755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 247339 |
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| End bp | 248295 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641662975 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001789271 |
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| Protein GI | 171056922 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00153473 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTGGG ATCTGGCCTA CAAGCTGCTG GCGCTGTTCG CGATGATCGC GATCGGCTAC
GGCGCCACGC GCCTGGGCGT GCTCGGCGGC GCCGACGGGC AACGGGCGCT GGCCAGCGCG
GCGTTCGGGC TGTTCCTGCC GGCGCTGCTG TTCCGCACCA CCGCCGGGAT CGACCTGTCC
GACCTGCCGG GGCCGCTGCT GCTGGCGTTC TTCGGCCCGC TGGTGCTCTG GGCGCTGGCG
ATCTGGTACG TCTACCGGCG CCGCGGGCCG GCCCATCCGG CCGATCCGGC GGTGCGCGCG
GTGTCGCTGA GTTTCGGCAA CACGGTGCAG GTCGGCCTGC CGTTTGCCGC TGCGCTGTTC
GGCGAGGCCG GGCTGCAGCT GCACCTGGCG ATCGTCAGCC TGCACGCGCT GGTGCTGCTG
AGCCTGCTGA CGGTGCTGGC CGAGGTCGAC ATCGCCCATG CCGCCGCGCG CCGTGGCAGC
GCGGCCGCGC TCGGCAGCCT GCTGCTGACC ATCGCCCGCC AGACGCTGAT CCACCCGGTC
GTGCTGCCGG TGCTGGCCGG CCTGGCCTGG CACCTGACGG GCTGGCAGCT GCATCCGGTG
GCCGACAACA TGCTGCTCAC GCTCGGCCAG GCCGGCGTGC CGCTGTGCCT GGTGCTGATC
GGCGCCTCGC TGGCGCAGTA CGGGCTGGGC AGCAGCTGGC AGCGTCTGCT GGGGCTGGTG
ATGCTCAAGC TGCTGTTGCT GCCGGCGATC GTGGCGGCGC TGGGCGTGTG GGTGTTCGGT
CTGCGCGGCC TGCCGCTGGC GGTGCTGGTG ATGGCCGCCG CGCTGCCCAG CGGCAGCAAC
GCGCTGCTGT TCGCGCAGCG CTACCGCACG CTCGAGGGCG AGGCCAGCGC GGCGATCGTG
CTGTCGACGC TGGGCTTCGC GCTGACCGCG CCGCTGTGGC TGAGCCTGCT GCTCTGA
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| Protein sequence | MTWDLAYKLL ALFAMIAIGY GATRLGVLGG ADGQRALASA AFGLFLPALL FRTTAGIDLS
DLPGPLLLAF FGPLVLWALA IWYVYRRRGP AHPADPAVRA VSLSFGNTVQ VGLPFAAALF
GEAGLQLHLA IVSLHALVLL SLLTVLAEVD IAHAAARRGS AAALGSLLLT IARQTLIHPV
VLPVLAGLAW HLTGWQLHPV ADNMLLTLGQ AGVPLCLVLI GASLAQYGLG SSWQRLLGLV
MLKLLLLPAI VAALGVWVFG LRGLPLAVLV MAAALPSGSN ALLFAQRYRT LEGEASAAIV
LSTLGFALTA PLWLSLLL
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