Gene Lcho_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0223 
Symbol 
ID6161943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp236209 
End bp236835 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID641662967 
Producthypothetical protein 
Protein accessionYP_001789263 
Protein GI171056914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00564186 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACGA CGATCGAGTC CGCACCCGCA CCCACGGCCG AGCTGTCCGC TGTGCTGATC 
CCGCTGCTCA AGGGCGTGAC CTACCGCGCC GACGACGCCG CGCACTGGAG CGCACTGCTG
CAACTGCAGG GCCGCGTGCG CGACCACGTG GCCGTGCTCG GCCTGGAGCT GATGCTCGAC
GAGGCCGAGG GTTACGCCTT CCTGCGCTCG CGTCCCGAGC CGGAGGATGA GGCCCTCCCG
AAGCTGCCGC GGCTGGTGGC GCGCCGGCCG CTGTCGTTTC CGGTCAGCCT GCTGCTGGCG
CTGCTGCGCA AGAAGCTCGC CGAGTTCGAC GCCGCCGGGG CCGACACCCG GCTGATCCTG
TCGCGCGAGC AGGTGGTCGA GCTGCTGCGG GTGTTCCTGC CCGAAGGCAG CAACGAGGCC
CGGCTGATCG ACCAGGTCGA CAGCCACCTC AACCGCGTCG TCGACCTCGG TTTCGTGCGG
CGCCTGCGTG GGCAGGACGG CCTGTTCGAG GTGCAGCGCA TCCTCAAGGC CTTTGTCGAC
GCGCAGTGGC TGGCCGAGTT CGATGCCCGG CTGGCCACCT ATCGCGCGCA GCTCGAAGGC
AAGGCGGGGG TGGCCGATGA AGAATGA
 
Protein sequence
MATTIESAPA PTAELSAVLI PLLKGVTYRA DDAAHWSALL QLQGRVRDHV AVLGLELMLD 
EAEGYAFLRS RPEPEDEALP KLPRLVARRP LSFPVSLLLA LLRKKLAEFD AAGADTRLIL
SREQVVELLR VFLPEGSNEA RLIDQVDSHL NRVVDLGFVR RLRGQDGLFE VQRILKAFVD
AQWLAEFDAR LATYRAQLEG KAGVADEE