Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0223 |
Symbol | |
ID | 6161943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 236209 |
End bp | 236835 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641662967 |
Product | hypothetical protein |
Protein accession | YP_001789263 |
Protein GI | 171056914 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00564186 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGACGA CGATCGAGTC CGCACCCGCA CCCACGGCCG AGCTGTCCGC TGTGCTGATC CCGCTGCTCA AGGGCGTGAC CTACCGCGCC GACGACGCCG CGCACTGGAG CGCACTGCTG CAACTGCAGG GCCGCGTGCG CGACCACGTG GCCGTGCTCG GCCTGGAGCT GATGCTCGAC GAGGCCGAGG GTTACGCCTT CCTGCGCTCG CGTCCCGAGC CGGAGGATGA GGCCCTCCCG AAGCTGCCGC GGCTGGTGGC GCGCCGGCCG CTGTCGTTTC CGGTCAGCCT GCTGCTGGCG CTGCTGCGCA AGAAGCTCGC CGAGTTCGAC GCCGCCGGGG CCGACACCCG GCTGATCCTG TCGCGCGAGC AGGTGGTCGA GCTGCTGCGG GTGTTCCTGC CCGAAGGCAG CAACGAGGCC CGGCTGATCG ACCAGGTCGA CAGCCACCTC AACCGCGTCG TCGACCTCGG TTTCGTGCGG CGCCTGCGTG GGCAGGACGG CCTGTTCGAG GTGCAGCGCA TCCTCAAGGC CTTTGTCGAC GCGCAGTGGC TGGCCGAGTT CGATGCCCGG CTGGCCACCT ATCGCGCGCA GCTCGAAGGC AAGGCGGGGG TGGCCGATGA AGAATGA
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Protein sequence | MATTIESAPA PTAELSAVLI PLLKGVTYRA DDAAHWSALL QLQGRVRDHV AVLGLELMLD EAEGYAFLRS RPEPEDEALP KLPRLVARRP LSFPVSLLLA LLRKKLAEFD AAGADTRLIL SREQVVELLR VFLPEGSNEA RLIDQVDSHL NRVVDLGFVR RLRGQDGLFE VQRILKAFVD AQWLAEFDAR LATYRAQLEG KAGVADEE
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