| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0218 |
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| Symbol | |
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| ID | 6163482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 229842 |
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| End bp | 230666 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641662962 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001789258 |
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| Protein GI | 171056909 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0125725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCAC CTCTACCCCT GCGCGCCATC GTGCTCGCCG CCGGCCGCGG CGAGCGCATG
CGGCCCCTGA CCGACACCAC GCCCAAGCCG CTGCTGCCGA TCTTCGGCCG GCCGATGATC
GAGTGGCACC TGCTCGCGCT GGCGCGTGAC GGCGTGCAGG AGGTGGTCAT CAACACCGCC
TGGCTCGAGG ATCAGTTCCC GGCCGTGCTC GGCGACGGCA GCCGTTTCGG CCTGCGGCTG
CGCTATTCGA CCGAAGGCCG CGAGCACGGC GGCGCACTCG AGACCGCCGG TGGCATCGCC
AAGGTCCGCG ACTGGCTCTG TGCCGACGGC CGTGCCGCGT TCTGGGTCGT CTCGGGCGAC
ATCTGGGCGC CGGACTTCCG CTTCGACGCC GAGCTGGCGC AGCGCTTCAT CGCCAGCGGC
CTCGACGCCC ACCTCTGGAT GGTGCCGAAT CCGCCCTTCC ATCCGAAGGG CGACTTCGCC
TTCGGCGCCG CACTGCCAGC GCTCGACGCC CAGGCTGCGC TGGCCGCGCC GATCGGCGGT
GACGCCGCGG GCCAGAACGG CGCGACCTAC GCCAACCTGG CGCTGATGCG GCCGTCGTTG
TGCGCCAGCG TCACGCCGGG CAGCCGATCG GCACTCGGGC CCCACCTGCA TGAGGGGATC
GCCGATCGTC GGATTTCGAT CTCGATGTAT CAAGGACGTT GGGAAAACGT CGGCACGCCG
GCCCAGTGGG CGGCGCTGCA GGATGCATCG AAGGATCCGG TTCATGACTC TGCTGCTCGC
CCTCTCCACC TGGCTGACCG CACTGGCGAT CGCGGTCGCG CTTGA
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| Protein sequence | MASPLPLRAI VLAAGRGERM RPLTDTTPKP LLPIFGRPMI EWHLLALARD GVQEVVINTA
WLEDQFPAVL GDGSRFGLRL RYSTEGREHG GALETAGGIA KVRDWLCADG RAAFWVVSGD
IWAPDFRFDA ELAQRFIASG LDAHLWMVPN PPFHPKGDFA FGAALPALDA QAALAAPIGG
DAAGQNGATY ANLALMRPSL CASVTPGSRS ALGPHLHEGI ADRRISISMY QGRWENVGTP
AQWAALQDAS KDPVHDSAAR PLHLADRTGD RGRA
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