| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0215 |
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| Symbol | |
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| ID | 6163479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 225895 |
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| End bp | 228036 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641662959 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_001789255 |
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| Protein GI | 171056906 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.101783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCACC CGAATCTGCT GGTCGAACTC TTCGTCGAAG AACTCCCGCC CAAGGCGCTC
AAGAAACTTG GCGAATCCTT CGCCGGCACG CTGGCCGCGA GCCTGAAGGC CGGCGGCCTG
GCCGGCGCCG ATGCGGTCGT GACGCCGTTC GCCTCGCCGC GCCGGCTGGC GGTGCACGTC
ACCGGCGTGG CGGCCAAGGC GGCCGACAAG TCGGTGCTGC ACAAGCTGAT GCCGGTGGCG
GTGGCGCTCG ACGCCGCCGG CAACGCCACG CCCGCGCTGC TCAAGAAGCT GGCCGCACTG
GGCGCCGACG CGTCGGTCGT GCCGAGCCTC AAGCGCCAGC CTGATGGCAA GGCCGAGGCG
CTGTTCCTCG ACTCGCAGGT GGCCGGCGCC ACGCTCGCCG AGGGCCTGCA GAAGGCGCTC
GACGACGCGC TCGCCAAGCT GCCGATCCCC AAGGTGATGG GCTACCAGCT GGCCGACGGC
TGGACCAGCG TCAACTTCGT GCGCCCGGCG CACGGCCTGG TGGCGCTGCA CGGCGACGAC
GTCGTGCCGG TCGCCACGCT CGGCCTCGTC GCCGGCCGCA GCACCCACGG CCACCGCTTC
GAGGCCGCCG TGCCGACGGT CGAGCTGCGC CACGCCGACA GCTACGCCGA ACAGCTCGAA
ACCGAAGGCG CGGTGATCGC CGGCTTCGAG GCCCGCCGCG CCGAGATCGT GCGCCAGCTC
GATGCCGCCG CCGCCGCGCA AGGCCTCAAG CCGATCGACG ACGATGCGCT GCTCGATGAA
GTGACGGCGC TGGTCGAGCG GCCCAACGTG CTGGTCTGCC AGTTCGAACC CGAGTTCCTG
GCCGTGCCGC AGGAATGCCT GATCCTGACG ATGAAGGCAA ACCAGAAGTA CTTCCCGCTG
CTGGATGCGG CGGGCAAGCT GACCCACAAG TTCCTGATCG TCAGCAACAT CCGCCCCGAC
GACGCCAGCG CGGTGATCGG CGGCAACGAG CGCGTGGTGC GCCCGCGCCT GGCCGACGCC
AAGTTCTTCT TCGACCAGGA CCGCAAGAAG ACGCTCGAAT CGCGGGTGCC CGGCCTGGCC
CGCGTGGTCT ATCACGGCAA GCTCGGCACC CAGGGCGAAC GCGCCGAGCG GGTGCGCGCG
ATCGGCCACG CCATCGTCAA CCAGCTGCGC ATGGCGACGA TCCCGTACAC GGTCGACGCG
CAGGACGAGT TCGCGGTGCT CGACAGCAAG GTGCAGCAGG CCGCACTGCT CGCCAAGACC
GACCTGCTGA CCGACATGGT CGGCGAGTTC CCCGAGCTGC AGGGGATCAT GGGCGGCTAC
TACGCGCGCC ATGAAGGCCT GCGCGACGGC GTGGCGATCG CGATCGAGGA CCACTACAAG
CCGCGTTTCG CCGGCGACGC GCTGCCGCGC AACCACACCG GCACGGTGCT GGCGCTGGCC
GACAAGCTCG AGACGCTGGT CGGCCTGTTC GGCATCGGCC AGCTGCCGAC CGGCGACCGC
GATCCGTTCG CGCTGCGCCG CCACGCGCTG GGCGTGATCC GCATCCTGGT CGAGAAGAAC
CTGCCGCTCG ACCTGCCCGC GCTGCTGAAC GGCGCGGTGC CGGCCTTCGG CGAGCTGATC
GAGGATCCGC GCCTGGCGCT GTTCGACTTC ATGCGCGACC GCCTGGCCGT CAACCTCCGC
GACCAGGGCT ACAGCGCCCA GGAAGTCGAC GCCGTGCTGG CGCTCGAACC CGCGCGCCTG
GGTGACGTGC CCAAGCGCCT GGCGGCCGTG CGCGCCTTCG CCGCCTTGCC TGAGGCGGCC
GCGCTGGCCG CCGCCAACAA GCGCATCGGC AACATCCTGA AGAAGGCCGA GGGCACGGTC
GAGGCCCGCA TCGACGCCGC GCTGCTGGCC GAGCCGGCCG AGCAGCAGCT CGCCGCCGCG
CTGGCGCAGG TGCAGCCGGG CGCCGATGCG CTGTTCGCCC AGGGCGAATA CGCCGCCAGC
CTGCAGGCGC TGGCCGCGCT GAAGGCGCCG GTCGACGCCT TCTTCGACGA CGTGATGGTC
AACGCCGAAG ACCCGGCCCT GCGCGCCAAC CGGCTCGGCC TGCTGGCCAC GCTGCACGGC
GCGATGAACC GGGTCGCCGA GCTGGCCCGC CTGGCCGCCT GA
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| Protein sequence | MSHPNLLVEL FVEELPPKAL KKLGESFAGT LAASLKAGGL AGADAVVTPF ASPRRLAVHV
TGVAAKAADK SVLHKLMPVA VALDAAGNAT PALLKKLAAL GADASVVPSL KRQPDGKAEA
LFLDSQVAGA TLAEGLQKAL DDALAKLPIP KVMGYQLADG WTSVNFVRPA HGLVALHGDD
VVPVATLGLV AGRSTHGHRF EAAVPTVELR HADSYAEQLE TEGAVIAGFE ARRAEIVRQL
DAAAAAQGLK PIDDDALLDE VTALVERPNV LVCQFEPEFL AVPQECLILT MKANQKYFPL
LDAAGKLTHK FLIVSNIRPD DASAVIGGNE RVVRPRLADA KFFFDQDRKK TLESRVPGLA
RVVYHGKLGT QGERAERVRA IGHAIVNQLR MATIPYTVDA QDEFAVLDSK VQQAALLAKT
DLLTDMVGEF PELQGIMGGY YARHEGLRDG VAIAIEDHYK PRFAGDALPR NHTGTVLALA
DKLETLVGLF GIGQLPTGDR DPFALRRHAL GVIRILVEKN LPLDLPALLN GAVPAFGELI
EDPRLALFDF MRDRLAVNLR DQGYSAQEVD AVLALEPARL GDVPKRLAAV RAFAALPEAA
ALAAANKRIG NILKKAEGTV EARIDAALLA EPAEQQLAAA LAQVQPGADA LFAQGEYAAS
LQALAALKAP VDAFFDDVMV NAEDPALRAN RLGLLATLHG AMNRVAELAR LAA
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