| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0199 |
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| Symbol | |
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| ID | 6161408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 207900 |
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| End bp | 209822 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641662943 |
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| Product | putative serine protein kinase, PrkA |
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| Protein accession | YP_001789239 |
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| Protein GI | 171056890 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2766] Putative Ser protein kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.392588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTGA TCAGCAACTT CGCCGCTCGC TACGAGCGCA CCAAAGAAGA GGAACTCACG
CTGGAGGAGT ACCTTGCCGA GTGCAAGCGC AACCCTCTGG CATACGCCAC GGCCCCCGAG
CGCATGCTCA AGGCCATCGG TGAGCCGCAG ATGGTCGACA CCCGCAACGA CCCGCGGCTG
TCGCGCATCT TTGCCAACAA GGTCATCAAG ATCTACCCGG CCTTCGCCGA GTTCTACGGC
ATGGAAGAGG CCATCGAGCA GGTGGTCAGC TACTTCCGCC ATGCCGCTCA GGGCCTGGAG
GAAAAGAAGC AGATCCTGTA TCTGCTGGGC CCGGTCGGGG GTGGCAAGAG CTCGATCGCC
GAGCGCCTGA AACTGCTGAT GCAGGAGGTG CCGTTCTACG CCGTCAAGGG CTCGCCGGTG
AACGAGTCGC CGCTCGGGCT GTTCGACAAC GACGAAGACG GACCGGTGCT CGAGAAGGAA
TACGGCATCC CGCGGCGCTA CCTCACGCGG ATCATGAGCC CGTGGGCGGT CAAGCGGCTG
GAGGAATACG GCGGCGACAT CCGGCGCTTC AAGGTGGTCC GGCGCTACCC GAGCATCCTC
AAGCAGGTCG GCATTTCCAA GACCGAGCCG GGTGACGAGA ACAACCAGGA CATCAGCTCG
CTGGTCGGCA AGGTCGACAT CCGCAAGCTC GAGACCTACG CGCAGGACGA CCCGGACGCC
TACAGCTACT CCGGCGGCCT GTGCCTGGCC AACCAGGGCC TGCTCGAGTT CGTCGAGATG
TTCAAGGCGC CGATCAAGGT GCTGCACCCG CTGCTGACGG CCACGCAGGA GTCCAACTTC
AAGGGCACCG AAGGCTTCGG CGCGATCCCG TTCGACGGCA TCGTGCTGGC GCACAGCAAC
GAGAGCGAGT GGAAGGCGTT CCGCAACAAC AAGAACAACG AGGCCTTCCT CGACCGGATC
TACATCGTCA AGGTGCCGTA CTGCCTGCGC GTGAGCGAGG AAGTGAAGAT CTACGAGAAG
CTGCTCAAGG GCAGCTCGCT GGCCGGCGCC ACCTGCGCAC CGGGCACGCT GAAGATGATG
AGCCAGTTCG CCATCCTGAC CCGCCTGAAG GAGCCCGAGA ACTCGAGCCT CTACAGCAAG
ATGATGGTCT ACGACGGCGA GAACCTGAAG GACACCGACC CGCGCGCCAA GAGCTACCAG
GAGTACCGCG ACTACGCCGG CGTCGACGAG GGCATGAGCG GCATCAGCAC GCGTTTCGCC
TACAAGATCA TCTCCAAGGT CTTCAACTTC GACAGCCAGG AGATCGCCGC CAACCCGGTG
CACCTGATGT ACGTGCTGGA GCAGCAGATC GAGCGTGAGC AGTTCCCGGC CGAGCTCGAG
CAGAAGTACG TCGCCTACAT CAAGGAGCTG CTGGCGCCGC GTTACGCCGA GTTCATCGGC
AAGGAGATCC AGACCGCCTA CCTGGAGAGC TACAGCGAAT ACGGCCAGAA CATCTTCGAC
CGCTACGTCA CCTACGCCGA CTACTGGATC CAGGACCAGG AATACCGCGA CACCGACACC
GGCGAGGTGT TCGACCGCGG CTCGCTGAAC GGTGAACTCG AGAAGATCGA GAAGCCCGCC
GGCATCGCCA ACCCGAAGGA CTTCCGCAAC GAGATCGTCA ACTTCGTGCT GCGTGCCCGG
GCCAACAACC AGGGCAAGAA TCCGGTCTGG ACCAGCTACG AGAAGCTGCG CGTGGTGATC
GAGAAGAAGA TGTTCTCCAA CACCGAGGAA CTGCTGCCCG TCATCAGCTT CAACGCCAAG
GCCAGCGCAG ACGAGGCCAA GAAGCACGAG GACTTCGTCA ACCGCATGGT CAACAAGGGC
TACACCGGCA AGCAGGTGCG GCTGCTGTGC GAGTGGTATC TGCGGGTGCG CAAGTCCAGC
TGA
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| Protein sequence | MDVISNFAAR YERTKEEELT LEEYLAECKR NPLAYATAPE RMLKAIGEPQ MVDTRNDPRL
SRIFANKVIK IYPAFAEFYG MEEAIEQVVS YFRHAAQGLE EKKQILYLLG PVGGGKSSIA
ERLKLLMQEV PFYAVKGSPV NESPLGLFDN DEDGPVLEKE YGIPRRYLTR IMSPWAVKRL
EEYGGDIRRF KVVRRYPSIL KQVGISKTEP GDENNQDISS LVGKVDIRKL ETYAQDDPDA
YSYSGGLCLA NQGLLEFVEM FKAPIKVLHP LLTATQESNF KGTEGFGAIP FDGIVLAHSN
ESEWKAFRNN KNNEAFLDRI YIVKVPYCLR VSEEVKIYEK LLKGSSLAGA TCAPGTLKMM
SQFAILTRLK EPENSSLYSK MMVYDGENLK DTDPRAKSYQ EYRDYAGVDE GMSGISTRFA
YKIISKVFNF DSQEIAANPV HLMYVLEQQI EREQFPAELE QKYVAYIKEL LAPRYAEFIG
KEIQTAYLES YSEYGQNIFD RYVTYADYWI QDQEYRDTDT GEVFDRGSLN GELEKIEKPA
GIANPKDFRN EIVNFVLRAR ANNQGKNPVW TSYEKLRVVI EKKMFSNTEE LLPVISFNAK
ASADEAKKHE DFVNRMVNKG YTGKQVRLLC EWYLRVRKSS
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