Gene Lcho_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0197 
Symbol 
ID6161406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp205896 
End bp206510 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content70% 
IMG OID641662941 
Producthypothetical protein 
Protein accessionYP_001789237 
Protein GI171056888 
COG category[R] General function prediction only 
COG ID[COG3545] Predicted esterase of the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTT CTCCCTCCCT TTCTCCCGGT CGTGACGCGG CCGGTGCTTC TTCCGATTCA 
CCCGAGGCGC ATCGGGTCCT GATCCTGCCG GGCTGGCAGG ATTCGGACGC CGACCACTGG 
CAAAGCCGCT GGGTCGCCCT GCACGGCTAC GAGCGCGTCG AGCAGAGCGA CTGGTTGTGG 
CCACGCCGAG GCGACTGGAT GGCGCGCCTC GACGAGGTCG TGCAGTCCGA CGACCGCCCG 
GTGGTGCTGG TGGCGCACAG TCTCGGCTGC CACCTGGTGG CCGCGTGGTC GGCGCACAGT 
GCCCACGCGG CGCGCGTGCA GGCGGCCTTG CTGGTGGCGC CGCCCGATAC CGAGCGGCCC 
GACATGCCGC CCCAGTTGCA CAACTGGCGT CCGATCAACC GGCGCCGCCT GCCGTTTGCA 
TGCTGTGCCG TGATCTCGAG CGACGACCCG TACGGTTCGC ATGAACGTTC GCTCGGCTTG 
TGCTCCGAAT GGGGCGCCGA GGTCGTGGAA GCGGGGGCGC GGGGGCATCT CAATTCGGTG 
TCCGGCCTGG GCGATTGGCC CGAGGGCCAT GCTGCGCTGC AGGATCTGAT TCGGCGCGCG 
AGGCAGACCG GCTGA
 
Protein sequence
MAISPSLSPG RDAAGASSDS PEAHRVLILP GWQDSDADHW QSRWVALHGY ERVEQSDWLW 
PRRGDWMARL DEVVQSDDRP VVLVAHSLGC HLVAAWSAHS AHAARVQAAL LVAPPDTERP 
DMPPQLHNWR PINRRRLPFA CCAVISSDDP YGSHERSLGL CSEWGAEVVE AGARGHLNSV 
SGLGDWPEGH AALQDLIRRA RQTG