Gene Lcho_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0196 
Symbol 
ID6160710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp204878 
End bp205825 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content68% 
IMG OID641662940 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_001789236 
Protein GI171056887 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01851] N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGA AACATACCGT GTTTGTCGAC GGCCAGGAGG GCACGACCGG CCTGCGCATC 
CACGAATACC TGGCACAGCG CGCCGACATC GAGGTGTTGC GCATCGCCCC CGAGCTGCGC
AAGGACGGCG CCGAGCGCGC CCGCCTGCTC AACGCCGCCG ACGTGGCCTT CCTGTGCCTG
CCCGATGCCG CCGCCAAGGA AGCGGTGGCG CTGATCACCA ATCCGGACAC CTGCCTGATC
GACGCCAGCA CGGCGCACCG CATCGAACCG GGCTGGGCCT TCGGCCTGCC CGAACTGGCG
CCGGGCCAGC GCGAACGGCT GCGCACCGGC AAGCGCATCG CCAACCCGGG CTGCCACGCC
AGCGCCTTCA TCCTGCTGCT GCGGCCGCTG GTCGACGCCG GTCTGGTGGC GCCTGAACTG
GCCGTCAGCG CCACCTCGAT CACGGGCTAC TCGGGTGGCG GCAAGAAGAT GATCGAGCAG
TACCAGGCCG GCGACGATGC CCGTCTGCAG TCGCCGCGGC CTTATGCGCT GAGCCTGGCG
CACAAGCACA TCCCGGAAAT GATGGCGCAC ACCGGGCTGC GCACCAAGCC GCTGTTCATG
CCGGTGGTGG GCGACTTCTA CAAGGGCCTG GCCGTGACGG TGCCGCTGCA CCTGAATCAA
CTGGTCGCAG GCACCAGCGC GCAGCGCATC CATGACGCCT TGAGCCGCCA CTACGAGGGC
GAGGCTTTCG TGCGGGTGAT GCCGCTCAAC GACGCGGCCA CGCTGGAGGA CGGATTCTTC
GACATCCAGG CCTGCAACGA CACCAACCGG GTCGACCTGT TCGTCTTCGC GCAGGGTGAA
CAGGCCCTGC TGATGGCGCG CCTGGACAAC CTGGGCAAGG GCGCCAGCGG GGCAGCGGTG
CAGGCCATGA ACCTGCACCT GGGTGTCGAC GAGGCCCTGG GCCTGTAG
 
Protein sequence
MSKKHTVFVD GQEGTTGLRI HEYLAQRADI EVLRIAPELR KDGAERARLL NAADVAFLCL 
PDAAAKEAVA LITNPDTCLI DASTAHRIEP GWAFGLPELA PGQRERLRTG KRIANPGCHA
SAFILLLRPL VDAGLVAPEL AVSATSITGY SGGGKKMIEQ YQAGDDARLQ SPRPYALSLA
HKHIPEMMAH TGLRTKPLFM PVVGDFYKGL AVTVPLHLNQ LVAGTSAQRI HDALSRHYEG
EAFVRVMPLN DAATLEDGFF DIQACNDTNR VDLFVFAQGE QALLMARLDN LGKGASGAAV
QAMNLHLGVD EALGL