Gene Lcho_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0193 
Symbol 
ID6160707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp202186 
End bp203130 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content69% 
IMG OID641662937 
Productserine/threonine protein kinase 
Protein accessionYP_001789233 
Protein GI171056884 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGGG TCCACCTGGC ACACGAGATC GAAACCGGCC AGGAAGTCGC CATCAAGACG 
CTGGCGCTCG CCCGCGAGTT CAGCGGCTTC GCGCTGCGCG AGGCCTACGC CCGCTTCCAG 
CGCGAGATAC AGGCCGCCGG CCGGCTGCGC CATCCGGACA TCGTGCGCGT GATCGACTCC 
GGCGAGACCG ACGGACTGGC CTACATCGTG ATGGAGCGCC TGCACGGCAA AGACCTGTCC 
AACCACACGC AGGCGCAGAC CCTGATGCCG GTCTCGACCG TGGTGGCGAT CGGCGCCCGT 
GTGGCCTCGG CGCTCGCGCA CGCGCACGCG CACGGAGTTG TCCACCGCGA CATCAAGCCC 
GCCAACGTGA TGATCGACGG CCCGCGCAAT CAGGTCAAAG TGATGGATTT CGGCATCGCC 
CGCCTTCACG ACGCCAGCCG CACGCGCACG GGGCTGGTGC TCGGCTCGCC GTCATACATG 
TCGCCGGAGC AGCTGGCCGG ACGCAATGTC GACGGCCGCA GCGATCTGTA TTCGCTGGGC 
GTGCTGCTGT TCCAGCTGTT GACGTCTCGC CTGCCGATCG TCGGCACGTC GATGGCCTCG 
TTGATCCATG CCATCGCCCA CACCAACGCG CCCGACGCAC GGCAGCTGCG CCCGGGCTTG 
CCAGAGGAAC TGGCCAACCT CGTCAGCATC CTGCTCGAGA AACGCCCGGA GCTGCGCTAC 
CGCGACGGCC TGGACGTGGC CGCCGATCTG CGCCTGATCG CATCGATGCT GCAGCGCCGC 
ACCGACGCCT CGAGCGATCA GCCGATGCTG TCGGACGCAG CGCCTGCCAC GGCGGCGGCT 
GTCGATCCCG CGCCGCAAGA TGCGGCATCG GTGCAGGAAG TCGCGCCAGC CGCGGACCCG 
GACGTTTCTC ACGCTGCAGC GATGCGGGCA CAATCCCGCC CGTGA
 
Protein sequence
MGRVHLAHEI ETGQEVAIKT LALAREFSGF ALREAYARFQ REIQAAGRLR HPDIVRVIDS 
GETDGLAYIV MERLHGKDLS NHTQAQTLMP VSTVVAIGAR VASALAHAHA HGVVHRDIKP 
ANVMIDGPRN QVKVMDFGIA RLHDASRTRT GLVLGSPSYM SPEQLAGRNV DGRSDLYSLG 
VLLFQLLTSR LPIVGTSMAS LIHAIAHTNA PDARQLRPGL PEELANLVSI LLEKRPELRY 
RDGLDVAADL RLIASMLQRR TDASSDQPML SDAAPATAAA VDPAPQDAAS VQEVAPAADP 
DVSHAAAMRA QSRP