Gene Lcho_0191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0191 
Symbol 
ID6160705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp200642 
End bp201328 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content63% 
IMG OID641662935 
ProductFHA domain-containing protein 
Protein accessionYP_001789231 
Protein GI171056882 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGC TCGTCGTCTC CCTAGACGGA GTTGTCATCA AGGAAGTCCA GCTCACAAAG 
GACAAGACGA CGCTCGGTCG ACGGCCCTAT AACGACATCG TGATCGACAA CCTGGCAGTG 
AGCGGCGAAC ACGCCGTGCT GCAGATGGTC GGGCAGGATG TCTACATCGA AGACCAGAAC 
AGCACCAACG GCACGTACAT CAACGGTCGC GCCGTCAAGA AGCAGCTGCT GCAGCACAAC 
GACACGGTCG AGATCGGCAA GTACAAGATC AAGTATCTGG TCGAGGACAG CGCCGACTAC 
GAAAAGACCA TGATCCTCAA GCCCGGGCAG ATGCCTCCGG GCCTGTCGGC TCGGCCGACA 
CCGCCCACGA TGCCGGGCCA TCTGCCGCCA CCGTCCAACT TCGGCAGCCT CGGGATCTCG 
ACGGTCACCC AGGCGTCGAT CCGCGTGCTG TCGGGTGCCG CGGCGGGTCG CGAAGTCGCA 
CTGACCAAGG TCGTGACGAC CGTTGGCAAG CCGGGGGTTC AAGTTGCATC GATCACCAAG 
CGCCCCGGAG GCTACGTGTT CGCACACGTC GAAGGCGTCA ATCGGCCGAC CGTGAATGGC 
GCCGCCGTGC ACGGCGACCC GGTGCACCTC AAGGACGGCG ACGTGATCGA GCTGGCCGGG 
ACACAAATGC AGTTCGTCCA GCCCTGA
 
Protein sequence
MPKLVVSLDG VVIKEVQLTK DKTTLGRRPY NDIVIDNLAV SGEHAVLQMV GQDVYIEDQN 
STNGTYINGR AVKKQLLQHN DTVEIGKYKI KYLVEDSADY EKTMILKPGQ MPPGLSARPT 
PPTMPGHLPP PSNFGSLGIS TVTQASIRVL SGAAAGREVA LTKVVTTVGK PGVQVASITK 
RPGGYVFAHV EGVNRPTVNG AAVHGDPVHL KDGDVIELAG TQMQFVQP