Gene Lcho_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0184 
Symbol 
ID6161190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp193625 
End bp194320 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content72% 
IMG OID641662928 
Producthypothetical protein 
Protein accessionYP_001789224 
Protein GI171056875 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG ACACCGGCCC GCTGCCGCTG CCCCTGCCGC CGCTGGTCTC GCGCTCGCCC 
GATGATGCGG CGAACCGGCC GTTGCCCTGG CGCGCCCGGC TGCGTGCGGG CTTGCTGAAG 
TACCTCTCGG TGCTGCTGAT GGCGGTCGTC GCCGTGGCCA CCGGCTGGCT GGTCCGGCAG 
ACGCCGGTGA TCGAGCCCGA TGCCGGTGTC GCGGCGCCCA CCGCCGAGCC CGATTACGAG 
ATGCGCGGTT TTTCGATCCA GCACTACACC GCGGCCGGTC CGGCGCAGGG CGTGATCGAG 
GGGGACGTGG TGCGGCATTT CCCCGTCACC GATCAACTGG TGATCGACGG CGTCCGGGTG 
CAGTGGACGG ATCCGGGCGG GCAGGCCATC CGTGCCTCGG CCGCCCGCGC CGTCGCAGAG 
GGCGACGGCA GCCTGGTGCG CCTGGAGGGC GGGGCGCGGG TGGTGCGGGA TCCGGCACCG 
GGCGAGACCA GCCCGTTCGA GTTCATCAGC GACGTCCTCG TCTTCGACAC CCGCAACGGC 
CAGGTGCGCA GCGACCGTCC GGTACGGCTG CGCCAGGGCG ACAACATCTT CGATGCCGCG 
TCGATCATCT ACGACCATCC GCAGCGCGTG GTCACGCTGG GAGGTGGCGT GCAGGGCCGC 
ATCCTGCCCA CCGAACTGAG TCGCTCGCTG CCCTGA
 
Protein sequence
MDNDTGPLPL PLPPLVSRSP DDAANRPLPW RARLRAGLLK YLSVLLMAVV AVATGWLVRQ 
TPVIEPDAGV AAPTAEPDYE MRGFSIQHYT AAGPAQGVIE GDVVRHFPVT DQLVIDGVRV 
QWTDPGGQAI RASAARAVAE GDGSLVRLEG GARVVRDPAP GETSPFEFIS DVLVFDTRNG 
QVRSDRPVRL RQGDNIFDAA SIIYDHPQRV VTLGGGVQGR ILPTELSRSL P