| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0161 |
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| Symbol | |
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| ID | 6160405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 168525 |
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| End bp | 169709 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641662905 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001789201 |
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| Protein GI | 171056852 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCT TTGACGCCAT CGTGATCGGT GCCGGCGTGA TCGGCAGCTC GGTCGCCTAC
CACCTCGCGC GTTTGGGCGC CCAGAAGGTG CTGGTGCTCG ACCGGCTGCA GATCGGCTCG
GGCACCAGCA CCCAGTCGTC GGGCATCTTG CGCACCCACT ACTCGGTGAT CGAGAACGTC
GAGCTGGCCA AGCGTTCGTG GTCGGTCTTC AACGACTTCG CCGGCTACCT GGGCGACGAG
GAAATGTCGG CCGGGCTGGT CAAGTGCGGC TACCTGATCT GCTCGCCCGA TGGCCCCAAG
CTCGCGCCCC TGCGGGCGGC CCTGGAGGGC CAGCGCTCGA TGGGCATCGA GGTGCAGCTG
ATCGACGCGG CCGCCGCGCG CGAGATGCTG CCGATCGCCC ACTTCGACGA CGCCGCGCTG
ATCGGCTACG AGCCCGAGGC GGGTTTTGCC GACGCCTACC TGGTGGCCAC GGGTTTTGCG
CGGGCGGCGC GCCGGCTGGG CGTCAAGATC ATGGAGGGCG TCAACGTCGA GCGGCTGCTG
ATGGACGGCG GCCGGGTGGT CGGCGTGGAG ACGAGCCAGG GCACGTTCTT GAGCCCCACC
GTCATCAGCA CCCAGAACAT CTGGGCCGGT GACATCGAAC GCTGGACCGG CGTGCCGACC
CCGGTGAAGG CCGAGCGCCA CGCCGTGCTG GCACTCGAAG GCCCCGAGGC CTACAGCTTC
AAGATGCCGG TCTTCAAGGA CCTGGGCTCG CCCGGCATGC TCTATTGCCG CAGCTACGGC
GGTAACCAGA TGCTGGTCAG CGAAGGCACG GTGGGCGAGA CGCTGGCGCA GCCCGACAAC
GAGCAGGGCG ACATCTCGAT GGACTACGTG GTCGAGGTCG GCGCCCAGGT GGCCGAGCGT
TTCCCGTCGT TCGGCGAGGC GGGGCTGGCT TCGTCGTGGA CCGGCGTCTA CGACGTCACG
CCCGACTGGA ACCCGGTGCT CGGCCGCCTG CCCGACGTGC CGGGGCTGAT CGTCGGCTAC
GGCTTCTCCG GCCACGGCTT CAAGCTCTCG CCCGGTGTCG GCCGCGTGCT GGCGCAGGAG
GCGCTGGGCC TGCCGACCGA CGTGTCGCTC GCGCCCTACG CACACGAGCG TTTCCGCAGC
GGCCACTTGC TGAGCGGCAA GTACGGCCTG GGCGCGGTCT CCTGA
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| Protein sequence | MQSFDAIVIG AGVIGSSVAY HLARLGAQKV LVLDRLQIGS GTSTQSSGIL RTHYSVIENV
ELAKRSWSVF NDFAGYLGDE EMSAGLVKCG YLICSPDGPK LAPLRAALEG QRSMGIEVQL
IDAAAAREML PIAHFDDAAL IGYEPEAGFA DAYLVATGFA RAARRLGVKI MEGVNVERLL
MDGGRVVGVE TSQGTFLSPT VISTQNIWAG DIERWTGVPT PVKAERHAVL ALEGPEAYSF
KMPVFKDLGS PGMLYCRSYG GNQMLVSEGT VGETLAQPDN EQGDISMDYV VEVGAQVAER
FPSFGEAGLA SSWTGVYDVT PDWNPVLGRL PDVPGLIVGY GFSGHGFKLS PGVGRVLAQE
ALGLPTDVSL APYAHERFRS GHLLSGKYGL GAVS
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