| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0155 |
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| Symbol | |
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| ID | 6162575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 160551 |
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| End bp | 162923 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641662899 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001789195 |
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| Protein GI | 171056846 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG3665] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTGC CGAGCGATGC CGCAATGCCG GGGCGTCGCC CGGTCGTAAC GCGTGCGCGT
GAACCCTCGC TGTTCGCACG CACGCCATCC TTGGAACGCT ACAAGGTCGC CGGCGGCGGC
CTCACGGTGA TCGCGCTGGC CGCGGGCGAT CAGCTGGAGG TGATCGATCC GGAAGGCCTG
CAAGCCTGCG AACTGCAGGT CTGGGACGCC CAGGGCCGCG AGGCCCTGGC CGCACTCGGC
CTGCGATCGA GCCCGGGCGC CGTTGCCATC GCCACGATGC TGCAGCGTGA CAGCGCCTCG
GTGCGCCCGG TGCGCACCGG GCTGCAGCGC CGCGGCATCG ACTTGGCCGC GTTGCCATCG
GCCTGCCAGC TCTGGCCGGC CGATGGCCTG GCCGGCCAGC GTCAGCGCTG CACCGCCACC
GACGACGTGC TGGTGGTGGT CGCGGCACCG GGCCCGAGCG GCTCGGTGCA CGCGCAAGAC
GCCCCCACCC CGTTGGCCCT GCACGTGCAC CGCCACGCCA CCCGCATCCT GCAGGCCGTA
CCCCTGCCCG CACCGCTGGG CGAGGTGGTC GACGAGTTCA CCATCGCGCC CGGCACCGCG
CGCAGCTACA CCGTGTCGCC GGGCCAGTAC ATCCAGGTCA TCGACGTGGC CGGGCGGCAG
TGCTCGGACT TCGTCGCCTT CAACCGCCGG GCGCTGGAGC GCGGCATCGA GCAGGAGCTC
GACCCGACCG TCACGCGCAC GCTCAGCGGC CGCGCCTACC CGGGCCCCGG CCTGCACTCG
CGTTTCTTCG ACCGCCAGAT GCAGCCGGTG CTCGAGGTGG TGCAAGACAC CGTCGGCCGC
CACGACACCT TCGGGCTGGC CTGCGCGGCG CGCTACTACG AGAGCATGGG CTACTTCGGC
CATGCCAACT GCAGCGACAA CCTGTCGGCC GCGCTGGCCG CGTATGGCGT GCAGGCGCGC
CCGGGCTGGC CCGCGATCAA CTTCTTCTAC AACACCGGCG TCGACGCGCA CGACCAGCTG
ACGATGGACG AACCCTGGTC GCGACCGGGC GACCACGTGC TGCTGCGCGC GCTCGACGAG
ATGGTCTGCG CCAACACCTC GTGTCCGGAC GACATCGATC CGGCCAACGG CTGGATGCCC
ACCGACATCC ACATCCGCAT CTACGCCGCC CAGGAGCGTT TCAGCATGGC CATCGCGCAC
CGCGCCACCC CCGACGCCGA ACCGGTGTTG ACCCGCGAGA GCGGCTTCCA CCCGGCCACC
TCGGCGCTGA CGCGCCAGTT CACCGAATAC CGCGGCTGGT GGACACCGAG CCGCTACGAC
GGCCACGGCG CGATCGAGGA ATACCACGCC TGCCGCGAGC GCGTGGCGGT GATGGACCTG
TCGGCGCTGC GCAAGTTCGA GGTCATCGGC CCCGACGCCG AGGCGCTGAT GCAGCACTGC
CTGACACGCG ACATCAAGAA GCTGGCGGTC GGCCAGGTGG TCTATTCGGC CATGTGCTAT
CCGCACGGCG GCATGCTCGA CGACGGCACG CTGCTGCGCC TGGGCCCCGA CAACTTCCGC
TGGATCTGCG GCGAGGACTA CGCCGGCATC TGGCTGCGCG AGCAGGCACA AAAACTCGGC
ATGAAGGTCT GGATCAAGTC GGCCAGCGAC CACATCCACA ACATCGCCGT ACAGGGCCCG
CGCTCGCGCG AACTACTGAG CCAGATGGTC AGCTCACCGG GCACGCAGCC CACGCTCGAC
AAGCTCGGCT GGTTCCGCTT CCTGGTCGGC CGGCTCGACG ATCACAACGG CTGCCCGATC
ATGGTCTCGC GCACCGGCTA CACCGGCGAG CTGGGCTACG AGGTCTGGTG CCACCCGAGC
GACGCACCGC GCGTGTGGGC ACGGATCTGG GAACTGGGTG CACCGCTCGG CCTGACACCG
CTCGGGCTCG AAGCCCTCGA CACGCTGCGC ATCGAGGCGG GCCTGGTGTT CGCCGGCTAC
GAGTTCTGCG ACCAGACCGA TCCGTTCGAG GCCGGCATCG GCTTCTGCGT GCCGCTCAAG
AGCAAGACCG ACGACTTCAT CGGCCGCGAC GCGCTGATCG AACGCGCGGC TCACCCGCAG
CGCAAGCTGG TCGGGCTGGT GCTCGACGGC AACGAGACCG CCGCGCATGG CGACGGCGTC
TACATCGGCC ACGCCCAGGT CGGCGTGATT ACCAGCGCCA CCCGCTCACC GCTGACGGGC
CAGAACATCG CGCTGTGCCG CATCAGCGTG ACCAGCGCGG CGCCGGGCAC GCGGGTGGAA
GTGGGCAAGC TCGACGGCCA CCAGAAACGC CTGCCGGCCA GCGTGGGCCC GGCGATCTTC
TACGACCCCG ACAAGAGCCG CGTGCGCGCC TGA
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| Protein sequence | MGLPSDAAMP GRRPVVTRAR EPSLFARTPS LERYKVAGGG LTVIALAAGD QLEVIDPEGL
QACELQVWDA QGREALAALG LRSSPGAVAI ATMLQRDSAS VRPVRTGLQR RGIDLAALPS
ACQLWPADGL AGQRQRCTAT DDVLVVVAAP GPSGSVHAQD APTPLALHVH RHATRILQAV
PLPAPLGEVV DEFTIAPGTA RSYTVSPGQY IQVIDVAGRQ CSDFVAFNRR ALERGIEQEL
DPTVTRTLSG RAYPGPGLHS RFFDRQMQPV LEVVQDTVGR HDTFGLACAA RYYESMGYFG
HANCSDNLSA ALAAYGVQAR PGWPAINFFY NTGVDAHDQL TMDEPWSRPG DHVLLRALDE
MVCANTSCPD DIDPANGWMP TDIHIRIYAA QERFSMAIAH RATPDAEPVL TRESGFHPAT
SALTRQFTEY RGWWTPSRYD GHGAIEEYHA CRERVAVMDL SALRKFEVIG PDAEALMQHC
LTRDIKKLAV GQVVYSAMCY PHGGMLDDGT LLRLGPDNFR WICGEDYAGI WLREQAQKLG
MKVWIKSASD HIHNIAVQGP RSRELLSQMV SSPGTQPTLD KLGWFRFLVG RLDDHNGCPI
MVSRTGYTGE LGYEVWCHPS DAPRVWARIW ELGAPLGLTP LGLEALDTLR IEAGLVFAGY
EFCDQTDPFE AGIGFCVPLK SKTDDFIGRD ALIERAAHPQ RKLVGLVLDG NETAAHGDGV
YIGHAQVGVI TSATRSPLTG QNIALCRISV TSAAPGTRVE VGKLDGHQKR LPASVGPAIF
YDPDKSRVRA
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