Gene Lcho_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0149 
Symbol 
ID6163205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp154994 
End bp155707 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content75% 
IMG OID641662893 
Productankyrin 
Protein accessionYP_001789189 
Protein GI171056840 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACATC CGAATCTGAC CGATCGCGCG CTGCTGGCCG CTCTGGCGGC GCTGCTGGGC 
GCCATGCCCG CAGCGGCGCA GGTCGGCCCC GCCGAGGCCG AGATCGCCGC CTACGCGCGC 
TCGGCCGAAA CCGCCTTGCA CGCCGCCGCG CAGCGCGGCG ACCTGCCGGC CTTGCGTGCG 
CTGCTGGCGC GGCCCGATGC GGCCGTGCGC ATCAAGGCGC GTGACGGCCA CGGCCGCACC 
GCGCTGCATG TGGCCACCTT CGCGCGCCAG CGCGAGGCGA TCCGCCTGCT GGCCGGCGCC 
GGCACCGATC TCGGCGCGCT CGAGAACGAC CGCTACGACG CCGTCACCAT CGCCGCGGTG 
GCCGATGACG AGACCACGCT GCGCGTGCTG CTCGAACTCG GCGCCAGCGC GAAGCTCGTC 
ACCAGCCGCT ACGACGGCAC CGCGCTGATC GCGGCGGCGC ACCTCGGCCA CGACGGCGTG 
GTGCGCCAGC TGATCGCCGC CGGTGCGCCG CTCGACCACG TCAACAACCT GCACTGGACG 
GCGCTGATCG AGGCCGTCGT GCTGGGTGAC GGCGGGCCGC GCCACCAGGC CACCGTGCGC 
GCGCTGGTCG AGGCCGGCGC CGATCGCAGC CTGAAGGACC GGCACGGCCG CACGGCGCTC 
GAACTCGCGC GTGAGCGCGG CTACGCCGAG CTGGTGCGTC TGCTCGGCGC GTGA
 
Protein sequence
MRHPNLTDRA LLAALAALLG AMPAAAQVGP AEAEIAAYAR SAETALHAAA QRGDLPALRA 
LLARPDAAVR IKARDGHGRT ALHVATFARQ REAIRLLAGA GTDLGALEND RYDAVTIAAV 
ADDETTLRVL LELGASAKLV TSRYDGTALI AAAHLGHDGV VRQLIAAGAP LDHVNNLHWT 
ALIEAVVLGD GGPRHQATVR ALVEAGADRS LKDRHGRTAL ELARERGYAE LVRLLGA