| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0148 |
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| Symbol | |
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| ID | 6163749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 152768 |
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| End bp | 154960 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641662892 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001789188 |
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| Protein GI | 171056839 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGA AGACACACGC CGGCCACGTT GGCCACCTGC AACCTGCGTC GTCAGCCGCA
ACACCCGCGG TCGACGCGCC GGCAGGCACG ATCTACACCT GCCCGATGCA CCCCGAGATC
CGCCAGGACC AGCCCGGCAA CTGCCCCAAA TGCGGCATGA CGCTGGAGCC GGTGATTCCC
GATCTCGACG AGACGGAGAA CCCGGAACTC GCCGACTTCA AGCGCCGCTT CTGGTGGACG
CTGCCCTTGA CGGTGATCGT CACCGTGCTG GCCATGTTCG GCCACCGCTT CGGCTGGTTC
GACATGGCCC GGCAGAGCTG GATCGAGCTG GCGCTGACGC TGCCGATCGT GCTCTGGGCC
GGCGCCCCCT TCTTCGTGCG CGGCGTGCGG TCGATCGCCC ACCGCAGCCC CAACATGTGG
ACGCTGATCG GCCTGGGCAC CGGCGCGGCC TTCGTCTACA GCGTCGTCGC CACCGTCGCG
CCGCAGGTCT TCCCGGCGTC CTTCGTCTCG ATGGGGCGGG TGGCGGTGTA CTTCGAGGCC
GCGGCCGTCA TCATCTCGCT GACGCTGCTG GGCCAGATCC TGGAGTTGAA GGCGCGCTCG
CAGACCTCGG CGGCGATCAG GTCGCTACTC GGGCTCGCGC CGAAGACCGC ACGGCGCATC
GCGGCCGATG GCAGCGAGTC CGACGTGCCG CTCGCGCACG TGCACGTCGG CGATCGGCTG
CGCGTGCGGC CTGGCGAGAA GGTGCCGGTC GACGGCGTCG TCATCGAGGG CAGCAGCGCG
CTCGACGAAT CGATGCTGAC CGGCGAGCCG CTTCCCGTGA CCAAGCGCGT GGGCGACAAG
CTGATCGGCG CCACCCTGAA CACCAGCGGC GCGCTGGTGA TGCGCTCGGA GCATGTCGGC
TCGGCCACGG TGCTTGCGCA GATCGTGCAG ATGGTCGCGA TGGCGCAACG CTCGCGCGCG
CCGATGCAGC GCATGGCCGA CACCGTGGCC GGCTACTTCG TCGTCGGCGT AGTGGGTGTC
GCCGTGCTGA CCTTCTTCGG CTGGGGCCTG TTCGGGCCCG AGCCGAGCTG GGTCTACGGC
CTGATCAACG CGGTGGCGGT GCTCATCATT GCTTGCCCCT GCGCGCTGGG CCTGGCCACG
CCGATGTCGA TCATGGTCGC CACCGGCCTG GGCGCCACCC ACGGCGTGCT GTTCCGCGAT
GCCGCCGCGA TCGAGAACCT GCGCAGGATC GACACCCTGA TCGTCGACAA GACCGGCACG
CTCACCGAAG GCCGTCCGAG CTTCGAGCGC GCCGTCGGGA CAGCCGGATA CACGGACGAC
GAGGTGCTCT GGCTGGCCGC CAGCCTCGAC CAGGGCAGCG AGCACCCGCT GGCCGCGGCG
ATCGTCGCCG CGGCCCGGCA ACGTGGGCTC GCCCTCGACA AGCCCGAGCA GTTCGACTCC
GAATCCGGCA TCGGCGTGCG CGGCCGCGTC GGTGGCCAGG CCCTCGCGCT GGGCAACACG
GCGTTGATGG CGCAACTCGG CGTCGACGTG TCGCCCCTGG CCACGCAGGC CGAGGCCCTG
CGCAGCCAGG GCGCCAGCGT GATGCACCTG GCGGTCGACG CCAGGCTGGC CGGCCTGCTG
GCGGTGTCCG ATCCGATCAA GGCGACGAGC GCAGAGGCGC TGGCGTCGTT GCGCGCGGCC
GGCCTGCGGG TGGTGATGGC CACCGGCGAC GGCCTGACCA CCGCGCGCGC AGTCGGCCAG
CGCCTGGGGC TGACCGAGAT CCACGGCGAA GTGAAGCCGG CCGACAAGCT CAGGCTGGTC
GAGCAACTGC AGGCCGAGGG CCGGCGCGTC GCGATGGCCG GCGACGGCAT CAACGATGCG
CCCGCGCTGG CCCGCGCCGA TGTCGGCATC GCCATGGGCA CCGGCACCGA CGTGGCGATG
AACAGCGCCC AGCTCACGCT CGTCAAGGGT GACCTGCGCG GCATCGCCAC CGCGCGCGCG
CTGTCGGTCG CCACTGTGGC CAACATGAAG CAGAACCTGG CCTTCGCCTT CGTCTACAAC
GCGCTGGGCG TGCCGCTGGC GGCCGGCGTG CTGTTCCCGT TCACCGGCTG GCTGCTGTCG
CCGATGATCG CGGCGCTGGC GATGAGTCTG AGCTCGGCCT CGGTGATCAC CAATGCGCTG
CGCCTGCGCC GCGCCGCATT GCGTCAGGAC TGA
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| Protein sequence | MDTKTHAGHV GHLQPASSAA TPAVDAPAGT IYTCPMHPEI RQDQPGNCPK CGMTLEPVIP
DLDETENPEL ADFKRRFWWT LPLTVIVTVL AMFGHRFGWF DMARQSWIEL ALTLPIVLWA
GAPFFVRGVR SIAHRSPNMW TLIGLGTGAA FVYSVVATVA PQVFPASFVS MGRVAVYFEA
AAVIISLTLL GQILELKARS QTSAAIRSLL GLAPKTARRI AADGSESDVP LAHVHVGDRL
RVRPGEKVPV DGVVIEGSSA LDESMLTGEP LPVTKRVGDK LIGATLNTSG ALVMRSEHVG
SATVLAQIVQ MVAMAQRSRA PMQRMADTVA GYFVVGVVGV AVLTFFGWGL FGPEPSWVYG
LINAVAVLII ACPCALGLAT PMSIMVATGL GATHGVLFRD AAAIENLRRI DTLIVDKTGT
LTEGRPSFER AVGTAGYTDD EVLWLAASLD QGSEHPLAAA IVAAARQRGL ALDKPEQFDS
ESGIGVRGRV GGQALALGNT ALMAQLGVDV SPLATQAEAL RSQGASVMHL AVDARLAGLL
AVSDPIKATS AEALASLRAA GLRVVMATGD GLTTARAVGQ RLGLTEIHGE VKPADKLRLV
EQLQAEGRRV AMAGDGINDA PALARADVGI AMGTGTDVAM NSAQLTLVKG DLRGIATARA
LSVATVANMK QNLAFAFVYN ALGVPLAAGV LFPFTGWLLS PMIAALAMSL SSASVITNAL
RLRRAALRQD
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