| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0136 |
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| Symbol | |
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| ID | 6161264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 139830 |
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| End bp | 140660 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641662880 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001789176 |
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| Protein GI | 171056827 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.350375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCC CTTCCACCTT CACGCCGGCC CTGGCCGTTC GCACGCTCGT CGCCTGGCTG
GTGACGCTGA TCCTGTTCTT CCCGCTCGGC TGGCTGCTGC TGACCGCGTT CAAGACCGAG
CTGCAGGCGA TCTCGGTGCC GCCGCTGCTG GTCTTCACGC CCACCTTCGA GAACTTCCAC
GAGGTGCAGG AACGCAGCGA CTACCTGCTG TACGCGAAGA ACTCGCTGAT CACCAGCGTC
GCGTCGACGA TCCTCGGCCT GCTGCTGGCC GCACCGGCGG CCTACTCGAT GGCGTTCTTC
CGCGGCCGCC ACACCAAGGA CATCCTGATG TGGATGCTGT CGACCAAGAT GATGCCGGCG
GTCGGCGCGC TGATGCCGAT CTACGTGCTG TCGCAGTGGT CGGGGCTGCT CGACAGCTGG
GTCGGACTGA CGATCATCTT CACGCTGTCG AACCTGCCGA TCATGGTGTG GATGCTGTAC
TCGGGCTACA AGGAGATCCC GCCCGACATC CTCGAAGCCG CGCGCATGGA CGGCGCCACG
CTGTGGCAGG AGGCCCGCCT GGTGCTGCTG CCGCTGTCGA TGGGCGGCCT GGCATCCACC
GGCCTGCTGT GCCTGGTGCT GAGCTGGAAC GAGGCGTTCT GGAGCCTGAC GCTGACCGCC
GCCAAGGCCG GCACGCTGGC CGCGCTGATC GCCAGCTACT CCAGCCCTGA AGGCCTGTTC
TGGGCCAAGC TGTCGGCCGC CTCGCTGATG GCCATCGCAC CGATCGTGGT GTTCGGCTGG
TTCAGCCAGA AGCAATTGGT CCAAGGCCTG ACCTTCGGCG CCGTCAAGTA A
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| Protein sequence | MARPSTFTPA LAVRTLVAWL VTLILFFPLG WLLLTAFKTE LQAISVPPLL VFTPTFENFH
EVQERSDYLL YAKNSLITSV ASTILGLLLA APAAYSMAFF RGRHTKDILM WMLSTKMMPA
VGALMPIYVL SQWSGLLDSW VGLTIIFTLS NLPIMVWMLY SGYKEIPPDI LEAARMDGAT
LWQEARLVLL PLSMGGLAST GLLCLVLSWN EAFWSLTLTA AKAGTLAALI ASYSSPEGLF
WAKLSAASLM AIAPIVVFGW FSQKQLVQGL TFGAVK
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