| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0132 |
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| Symbol | |
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| ID | 6161260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 134806 |
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| End bp | 136296 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641662876 |
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| Product | xylulokinase |
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| Protein accession | YP_001789172 |
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| Protein GI | 171056823 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.162788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTCG GCATCGACCT CGGCACCTCG GAGGTCAAGT TCCTGTTGCT CGACGCCGCG
CACCACATCG TCGCCAGCGT CGGCGAGCCG CTCGCGGTGC AGCGCCCGCA GCCGCTGTGG
AGCGAGCAGA ACCCGGCCCA CTGGTGGGCT GCCACCGACC GCGCGCTGAC GCGCCTGGCC
GCCGAGCAGC CGCAGGCGAT GCGGGCGGTG CGCGCCATCG GGCTGTCCGG CCAGATGCAC
GGCGCGGTGC TGCAGGACGC ACGCGGCGAG GTGCTGCGCC CGGCCATCCT CTGGAACGAC
GGCCGCAGCG GCGCCGAATG CGCCGAGCTC GAAGCGGCCT TGCCGACGCT GCACGCGATC
ACCGGCAACC TGGCGATGCC CGGCTTCACG GCGCCCAAGC TGCTGTGGGT GAAGCAGCAC
GAGCCCGAAC TGTTCGCCCG CATGCGCCGC GTGCTGCTGC CCAAGGACTG GCTGCGCGAG
CAGCTCACCG GCGAGGCCGT CAGCGAGATG AGCGACGCCT CCGGCACGCT GTGGCTCGAT
GTCGCACAGC GGCGCTGGTC GGCCGAGGTG CTGGCGGCCT GCGGCATGGA CGAGTCGCAG
ATGCCGCGGC TGGTCGAGGG CAGCGAGGTG TCGGGCACGC TCAAGCCGGC GCTGGCGGCG
CGCTGGGGCC TGACGGCGGG CATCCCGGTG GCGGGTGGCG GCGGCGACAA CGCGGCCAGC
GCGGTGGGCA TCGGCGCGGT GCGGCCGGGC GAGGGTTTCG TGTCGCTGGG CACCTCGGGC
GTGATCTTCC TGGCCAGCGA CCGCTTCCGG CCCAATCCGG CCCACGCGAT GCACGCCTTC
TGCCACGCGC TGCCCGGGCG CTGGCACCAG ATGAGCGTGA TGCTCAGCGC CGCCAACGGC
CTGCGCTGGG TCAAGAACCT GCTGGGCGCG CACAGCGAGG CGGCGCTGCT CGACACGGTG
GCGGCGCTGA CGCCGTTGCA GCGCGCGCAG GCGCCGGTCT TCCTGCCCTA CCTCAACGGC
GAGCGCACGC CGCACAACAA CCCGCACGCG CAGGGCGTGT TCTTCGGCCT GAACAATGAA
CACGACGCCG CGGCGCTGGC CTACGCGGTG GTCGAGGGCG TCACGTTCGG CCTGCTCGAC
GGCTGGCACA GCCTGGGCAC GGCGCCGGGC GAGGTGCAGT CGCTCAGCCT GGTCGGCGGT
GGCGCGCGCA GCGCGCTGTG GGCGCAGCTG CTGGCCGATG CGATCGGCGT GCCGATGGTG
ACGCGCCAGG GCGGCGAGGC CGGCGGCGCG CTCGGCGCGG CACGGCTGGC GTGGCTGGCT
GACGGCGCCC GGATCGAGGA CGTCTGCCTG GCGCCACCGG TGGCCGCGGT GTTCGAGCCC
GACGCGGCGC GGGCGGCGCA GCTGCTGCCG CGGCATCGGC GCTTCCGGCG GCTCTATGCG
GCGCTGCGCG AGGAGTTTTC GGCCACATCC GCGACGGGTG CGGCTGGTTG A
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| Protein sequence | MYLGIDLGTS EVKFLLLDAA HHIVASVGEP LAVQRPQPLW SEQNPAHWWA ATDRALTRLA
AEQPQAMRAV RAIGLSGQMH GAVLQDARGE VLRPAILWND GRSGAECAEL EAALPTLHAI
TGNLAMPGFT APKLLWVKQH EPELFARMRR VLLPKDWLRE QLTGEAVSEM SDASGTLWLD
VAQRRWSAEV LAACGMDESQ MPRLVEGSEV SGTLKPALAA RWGLTAGIPV AGGGGDNAAS
AVGIGAVRPG EGFVSLGTSG VIFLASDRFR PNPAHAMHAF CHALPGRWHQ MSVMLSAANG
LRWVKNLLGA HSEAALLDTV AALTPLQRAQ APVFLPYLNG ERTPHNNPHA QGVFFGLNNE
HDAAALAYAV VEGVTFGLLD GWHSLGTAPG EVQSLSLVGG GARSALWAQL LADAIGVPMV
TRQGGEAGGA LGAARLAWLA DGARIEDVCL APPVAAVFEP DAARAAQLLP RHRRFRRLYA
ALREEFSATS ATGAAG
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