| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0127 |
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| Symbol | |
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| ID | 6162708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 130351 |
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| End bp | 131220 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641662871 |
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| Product | lipid A biosynthesis acyltransferase |
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| Protein accession | YP_001789167 |
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| Protein GI | 171056818 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0308089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCC CGCTGGGCTG GCTGGCGTAT TGGGCCTCGC CGAGCTACCG GCGCCGCATG
CACGACCACG TCGCCCAGGC CGGGCTGGCC TGGCCGCAGG CGCGGGCCGC GGTGGCGTCG
ACCGGCCGCA TGATGGCCGA GCTGCCCTGG CTGTGGAGCC GGCCGCCCGA AGCGCGTTTC
GGCGCGCTGG TGCAGTGGCA GGGCGAGGCG CACGTCGAGG CCGCCCTCGC CGCCGGCCGC
GGGCTGGTGC TGATGACGCC GCATGCGGGC GCCTTCGAGG TCATCGCGCA GGCCTATGCC
GAGCGCTTCG GCCACGTCCA GCCGATGACC GCGCTCTACC GGCCGGCCCG CAAGGCCTGG
CTGCGCGATC TGGTGGCCGG CTCGCGCAAC CGCCCCGGCC TGCTGACCGC GCCGGCCACG
CTGTCGGGCG TGCGGCAGAT GATCCGCGCG CTGCGCAACG GCGGCACGAT CGGCCTGCTG
CCCGACCAGG TGCCGCCCGA AGGCATGGGC GTGTGGGCGC CGTTCTTCGG CCGGCCGGCC
TACACCATGA CGCTGGCCGC ACGGCTGGTG CAGCAGACCG GCGCAGCCTG GCTGCCGGTG
GTCTGCGAGC GGCTGCCGGA CGCGCGCGGC TACGTGATCC GCGTCGACCC CCCGACCGAG
CCGATGCCGG GCACGCCCGG CGCCCCGCCG GTCGACACGA GCACCGATCC CAACGCGGTG
GCCATCGCCG CGGCCACCCT CGTCAACCGC GCGATGGAAC GCCTGATCCT CGGCCTGCCG
GGCCAGTATC TGTGGGGCTA CCACCGCTAC AAGAATCCCC GTCAGGCCGA GGCGGCGAGC
GATGCGCCGC AGGCTGGGGG CAACCCATGA
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| Protein sequence | MGGPLGWLAY WASPSYRRRM HDHVAQAGLA WPQARAAVAS TGRMMAELPW LWSRPPEARF
GALVQWQGEA HVEAALAAGR GLVLMTPHAG AFEVIAQAYA ERFGHVQPMT ALYRPARKAW
LRDLVAGSRN RPGLLTAPAT LSGVRQMIRA LRNGGTIGLL PDQVPPEGMG VWAPFFGRPA
YTMTLAARLV QQTGAAWLPV VCERLPDARG YVIRVDPPTE PMPGTPGAPP VDTSTDPNAV
AIAAATLVNR AMERLILGLP GQYLWGYHRY KNPRQAEAAS DAPQAGGNP
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