| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0114 |
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| Symbol | |
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| ID | 6161883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 118240 |
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| End bp | 118644 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641662858 |
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| Product | TfoX domain-containing protein |
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| Protein accession | YP_001789154 |
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| Protein GI | 171056805 |
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| COG category | [K] Transcription |
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| COG ID | [COG3070] Regulator of competence-specific genes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0317949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGAAG AACTCGTCAA CCACGTGCTG GAGCTGCTGG CGCCGCTCGG CCGGGCCCGG
TCGCGGCGCA TGTTCGGCGG CCAGGGTTTC TATGTCGACG ACCTGTTCAT CGCGCTGATC
GCCGACGGCC GGCTCTACCT GAAGGTCGAT GCGCAGAGCC GGGCCGTCTT CGAGTCGGCC
GGCTGCGAGC CCTTCGCCTA CCAGCGCGCC GGCGGCGAAC GCGCCGTGAT GAGCTACTTC
AGCGCGCCCG ACGACGCCAT GGAGTCGCCC GCGCTGATGC AGCCGTGGGC GCGACTGGCG
CTGGCGGCGG CCGTGCGGGC CAGGGCGGCC CAGCCTTCGA GGCCGCGCGC CAGCCGGTCG
AGCGCGCCGG CCGCCAGGAA GACCAGCGCC CGCCCGAAGC GCTGA
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| Protein sequence | MAEELVNHVL ELLAPLGRAR SRRMFGGQGF YVDDLFIALI ADGRLYLKVD AQSRAVFESA
GCEPFAYQRA GGERAVMSYF SAPDDAMESP ALMQPWARLA LAAAVRARAA QPSRPRASRS
SAPAARKTSA RPKR
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