Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0106 |
Symbol | |
ID | 6163521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 108666 |
End bp | 109925 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641662850 |
Product | polynucleotide adenylyltransferase/metal dependent phosphohydrolase |
Protein accession | YP_001789146 |
Protein GI | 171056797 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000490543 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGATGCC TGCTCGTCGG TGGCGCGGTG CGCGACCAGC TGCTCGGCCG CCCGGTCGGC GACCGCGACT GGGTGGTGGT GGGCGCCACG CCCGAGCAGA TGGTGGCCGC CGGTTATCTG CCGGTCGGGC GCGATTTCCC GGTCTTCCTG CACCCGCGCA CGCACGAGGA ATACGCGCTG GCGCGCACCG AGCGCAAGAC CGCGCCGGGT TATCACGGCT TCGTCTTCCA CACCGGCGCC GACGTGTCGC TCGACGACGA CCTGGCGCGA CGCGACCTGA CCATCAACGC GATGGCGCTC GACGAGGCCG GCACGCTGAT CGACCCCTGG GGCGGCCGGC GCGACCTGGC ACACAAGTGC CTGCGCCACG TCGGCGCCGC CTTTGCCGAA GACCCGGTGC GCATCCTGCG GCTGGCGCGG TTTGCAGCGC GGCTGGGCGA TTTCAGCGTC GCGCCCGAGA CGCTGGCGCT GTGCCGGCGC ATGGTCGAGG CCGGCGAGGT CGACGCGCTG GTGCCCGAGC GCGTGTGGCA GGAACTCTCG CGCGGGCTGA TGGAGGCACG GCCCTCGCGC ATGTTCGAGG TGCTGCGCGA CTGCGGCGCG TTGGCGCGCC TGCTGCCCGA GGTCGAGCGC CTGTTCGGCG TGCCGCAGCG CGCCGACTAC CACCCCGAGG TCGACACCGG CGTGCACCTG ATGATGGTGC TCGACACCGC CGCGCAGAGG GGCGTGTCGC TGCCGGTGCG TTACGCCTGC CTCGGCCACG ATCTTGGCAA GGGCACCACG CCGGCCCACA TCCTGCCGCG CCACATCGGC CACGAGGGCC GCAGCGCGGC GCTGCTGGCG CCCATGTCTG CGCGTCTCAA GGTGCCGGCG GCCTGTCACG AACTGGCCGA TCTGGTGGCG CGCGAACACA GCAACGTGCA CGGCAGCGGC AACTTCGACG CCGCCGCGCT GGTGCGCCTG TTCGACCGCT GCGACGCCTG GCGGCGCCCG GAACGTTTCG AACTGGCGCT GCAGGCCTGC GAGTGCGATG CCCGTGGCCG GCTCGGTTTC GAGCAGGCGC ACTACCCGCA GGCGCCGCGG CTGCGCCAGG CACTGGCGGC GGCGCGTGGC ATCGACGCCG CTGCGGTGAT GGCGTCGGCG CGCGCGCGTG GCCTCAATGG CCCGGCGCTC GGCCGGGCGT TGCACGAGGC CCGCATCGAG GCCGTGGCCT CAGATCCAGC GTGCCAGCGC CCAGCCGATC AGGCTCAGCA GAACGGTTGA
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Protein sequence | MRCLLVGGAV RDQLLGRPVG DRDWVVVGAT PEQMVAAGYL PVGRDFPVFL HPRTHEEYAL ARTERKTAPG YHGFVFHTGA DVSLDDDLAR RDLTINAMAL DEAGTLIDPW GGRRDLAHKC LRHVGAAFAE DPVRILRLAR FAARLGDFSV APETLALCRR MVEAGEVDAL VPERVWQELS RGLMEARPSR MFEVLRDCGA LARLLPEVER LFGVPQRADY HPEVDTGVHL MMVLDTAAQR GVSLPVRYAC LGHDLGKGTT PAHILPRHIG HEGRSAALLA PMSARLKVPA ACHELADLVA REHSNVHGSG NFDAAALVRL FDRCDAWRRP ERFELALQAC ECDARGRLGF EQAHYPQAPR LRQALAAARG IDAAAVMASA RARGLNGPAL GRALHEARIE AVASDPACQR PADQAQQNG
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