Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0101 |
Symbol | |
ID | 6163516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 104905 |
End bp | 105885 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641662845 |
Product | C32 tRNA thiolase |
Protein accession | YP_001789141 |
Protein GI | 171056792 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000472408 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACACCC CCACCGCCAC CCTGAACGCA CCGGCCGCGG ACGCCGAATC CGCCGCCGCC AGCGCCGCCG ACAAGAAGGC CGCCTTCGAG CTCAACAAGC TCAGCAAGCG GCTGCACCGC CAGGTCGGCC AGGCGATCAC CGACTTCAAC ATGATCCAGG AGGGCGACCG CGTGATGGTC TGCCTGTCGG GCGGCAAGGA CAGCTACGGC ATGCTCGACA TCCTGCTGGG CCTGCAGCAG CGCGCGCCGA TCACGTTCAG CATCGTGGCG GTCAACCTCG ACCAGAAGCA GCCCGGTTTC CCGGAGCACA TCCTGCCGGC CTACCTGAAG GCGCGCGGCG TCGAGTTCCA CATCGAGAAC CAGGACACCT ACAGCATCGT CAAGCGCGTG ATCCCCGAGG GCAAGACGAT GTGCAGCCTG TGCTCGCGTC TGCGCCGCGG CATCCTGTAC CGGGTGGCCG ACGAGCTGGG TGCGACCAAG ATCGCGCTGG GCCATCACCG CGACGACTTC CTCGGCACGG TGTTCCTCAA CATGTTCTTC GGCAGCAAGT TGAAGGGCAT GCCGCCCAAG CTGGTCAGCG ACGACGGCCG CCACACCGTG ATCCGCCCGC TCGCCTACGT GGCCGAGACC GACCTCGAGC GCTGGGCCGA ACATCGCGCG TTCCCGATCA TCCCGTGCAC GCTGTGCGGC ACGCAGGACA ACCTGCAGCG GGTGCAGATC AAGCACATGC TGCGCGACTG GGATCAGCGT TTTCCCGGTC GGATCGACAA CATGCATCGC GCGTTTTCAC AGGTGGTGCC CTCGCACCTG ATGGACCGCG CGCTGTTCCC CTTCGAGACC CTCGTGCCCA CCGGCGTGGC GGATCCGGCC GGCGACCGCG CCTTCGACGA GGACGACAGC GAGCTGTGCG CCCCGTCGGG CAGCGCCGAC GCGGCGGGCG ACGAGGTGAG CGTGCCGGTG GCGCTGATCC GCCGGGTGTG A
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Protein sequence | MNTPTATLNA PAADAESAAA SAADKKAAFE LNKLSKRLHR QVGQAITDFN MIQEGDRVMV CLSGGKDSYG MLDILLGLQQ RAPITFSIVA VNLDQKQPGF PEHILPAYLK ARGVEFHIEN QDTYSIVKRV IPEGKTMCSL CSRLRRGILY RVADELGATK IALGHHRDDF LGTVFLNMFF GSKLKGMPPK LVSDDGRHTV IRPLAYVAET DLERWAEHRA FPIIPCTLCG TQDNLQRVQI KHMLRDWDQR FPGRIDNMHR AFSQVVPSHL MDRALFPFET LVPTGVADPA GDRAFDEDDS ELCAPSGSAD AAGDEVSVPV ALIRRV
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