Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0099 |
Symbol | |
ID | 6161767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 103357 |
End bp | 104235 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641662843 |
Product | putative lipoprotein |
Protein accession | YP_001789139 |
Protein GI | 171056790 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00360013 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGGCCG CCGCACTCCT GCTCGCCACC TTGCTGATCG GCGGCTGCAG CACGCTGCGC TGGGGCTACA GCCAGGGCGA CACGCTGGCC TACTGGTGGC TCGATCGACA CGCCGGCTTC ACCGAGACCC AGGCGCCGCA GGTGCGCGCC GCGCTGGCGC AGTGGTTCGA CTGGCACCGC CGCGAGCAGC TGGCCGACGA CGTGGCGCTG CTCGAACAGA TCGCCCTCGC AGCGCCCGAC GACCTGAGCG CCGCCCAGGT CTGCGGCTGG TGGGGCACGC TCGAGAAAAG ACGCGCGCGC TACATGGCGA TGGCCGTGCC CGCGCTGGCC CGGATCGCGC CGACCTTGTC GGCCGAGCAG TGGCGCAGCG TGCAACAGCG CTTCGACAGG ACCAACGCCA CCTGGCGCGA CGAACAGCTC GGCGCCGACC CGCGCGAGCG CGAGCGCAAG GCCGTCGAAC GGGTGGTCGA GCGGGCCGAA AAGCTCTACG GCCGGCTCGA CGGCGCGCAG CGCGACTTCG TCACCGAGCG CATGCGCCGC TCGCCGTGGG ACGCGCAGCG CTGGCTCGAC GAGCGCCAGA TCGACCAGCG CGACACGCTG CGAACCTTGA GCGGCATGAG CGCAAACGGC CAGACCGAGG CGCAGCGGCA GGAGATCGTG CACGCCTGGC TCGGCCGCGT CGTGCAGCCG AGCGACGCGG CGGCCGGCCG CTGGCGGGCC AGCCTGCGCG ACGACCAGTG CGCGCTCAGC GCCGAGCTGC ACAACCGCAG CAGCGCGGCG CAGCGCCGGC AGGCCGTCGA AACCCTGCGC GGCTGGGCGC AGGACCTGCG CAGCTTCCTG CCGCCGGTCA GCGCGAAGCA GGCGGCAAAG GCACCGTGA
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Protein sequence | MTAAALLLAT LLIGGCSTLR WGYSQGDTLA YWWLDRHAGF TETQAPQVRA ALAQWFDWHR REQLADDVAL LEQIALAAPD DLSAAQVCGW WGTLEKRRAR YMAMAVPALA RIAPTLSAEQ WRSVQQRFDR TNATWRDEQL GADPRERERK AVERVVERAE KLYGRLDGAQ RDFVTERMRR SPWDAQRWLD ERQIDQRDTL RTLSGMSANG QTEAQRQEIV HAWLGRVVQP SDAAAGRWRA SLRDDQCALS AELHNRSSAA QRRQAVETLR GWAQDLRSFL PPVSAKQAAK AP
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