Gene Lcho_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0099 
Symbol 
ID6161767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp103357 
End bp104235 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content74% 
IMG OID641662843 
Productputative lipoprotein 
Protein accessionYP_001789139 
Protein GI171056790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00360013 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGGCCG CCGCACTCCT GCTCGCCACC TTGCTGATCG GCGGCTGCAG CACGCTGCGC 
TGGGGCTACA GCCAGGGCGA CACGCTGGCC TACTGGTGGC TCGATCGACA CGCCGGCTTC
ACCGAGACCC AGGCGCCGCA GGTGCGCGCC GCGCTGGCGC AGTGGTTCGA CTGGCACCGC
CGCGAGCAGC TGGCCGACGA CGTGGCGCTG CTCGAACAGA TCGCCCTCGC AGCGCCCGAC
GACCTGAGCG CCGCCCAGGT CTGCGGCTGG TGGGGCACGC TCGAGAAAAG ACGCGCGCGC
TACATGGCGA TGGCCGTGCC CGCGCTGGCC CGGATCGCGC CGACCTTGTC GGCCGAGCAG
TGGCGCAGCG TGCAACAGCG CTTCGACAGG ACCAACGCCA CCTGGCGCGA CGAACAGCTC
GGCGCCGACC CGCGCGAGCG CGAGCGCAAG GCCGTCGAAC GGGTGGTCGA GCGGGCCGAA
AAGCTCTACG GCCGGCTCGA CGGCGCGCAG CGCGACTTCG TCACCGAGCG CATGCGCCGC
TCGCCGTGGG ACGCGCAGCG CTGGCTCGAC GAGCGCCAGA TCGACCAGCG CGACACGCTG
CGAACCTTGA GCGGCATGAG CGCAAACGGC CAGACCGAGG CGCAGCGGCA GGAGATCGTG
CACGCCTGGC TCGGCCGCGT CGTGCAGCCG AGCGACGCGG CGGCCGGCCG CTGGCGGGCC
AGCCTGCGCG ACGACCAGTG CGCGCTCAGC GCCGAGCTGC ACAACCGCAG CAGCGCGGCG
CAGCGCCGGC AGGCCGTCGA AACCCTGCGC GGCTGGGCGC AGGACCTGCG CAGCTTCCTG
CCGCCGGTCA GCGCGAAGCA GGCGGCAAAG GCACCGTGA
 
Protein sequence
MTAAALLLAT LLIGGCSTLR WGYSQGDTLA YWWLDRHAGF TETQAPQVRA ALAQWFDWHR 
REQLADDVAL LEQIALAAPD DLSAAQVCGW WGTLEKRRAR YMAMAVPALA RIAPTLSAEQ
WRSVQQRFDR TNATWRDEQL GADPRERERK AVERVVERAE KLYGRLDGAQ RDFVTERMRR
SPWDAQRWLD ERQIDQRDTL RTLSGMSANG QTEAQRQEIV HAWLGRVVQP SDAAAGRWRA
SLRDDQCALS AELHNRSSAA QRRQAVETLR GWAQDLRSFL PPVSAKQAAK AP