| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0095 |
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| Symbol | |
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| ID | 6161763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 98859 |
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| End bp | 100721 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641662839 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
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| Protein accession | YP_001789135 |
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| Protein GI | 171056786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00607775 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGTGGCA TCGTCGGCGC AGTCAGTCAA CGCAACATCG TCCCGATCCT GATCCAGGGT
CTGCAGCGGC TCGAATACCG CGGTTATGAC TCCTGCGGCG TGGCCGTGCA CCAGGGCGGC
GAGCTGCGCC GGGCGCGCAG CACCTCGCGG GTGGCCGAGC TCGATGCGCA GGTGCTGCAG
GACGGCGTCG AAGGCCTGAT CGGCATTGCC CACACCCGCT GGGCCACCCA CGGCGCGCCG
GCGGTGCACA ACGCCCACCC GCACTTCAGC CACGGCACCG GTGCCGACGC GAAGTCGGCC
AAGGCCGGCC GGATCGCGCT GGTGCACAAC GGCATCATCG AGAACCACGA CGAGCTGCGC
GCCGAACTCC AGGCCCGCGG TTACGAGTTC TCCAGCCAGA CCGACACCGA GGTCATCGCA
CACCTGGTCG ACTCGCTCTA CGAGGGCGAC CTGTTCGACG CCGTGCAGCG CGCGCTGCCG
CAACTGCGTG GCGCCTACGC GATCGCGGTG TTCTGCCGCG AGGAGCCGCA GCGCGTGGTC
GGCGCCCGCG AAGGCTCGCC GCTGGTGCTG GGCGTGGGCA AGGGCGAGAC CTTCCTGGCG
TCGGACGCGA TGGCGCTGGC CGGCGTCACC GACCAGATCG TCTACCTCGA AGAAGGTGAC
GTGGTCGACA TGCAGCAGGG CAAGTACTGG ATCACCGCGC GCGCCGACGG CGGCGCCCGC
CCCCGCGTCG ATCGCCCGGT CAAGACCGTG CACGCGCACA GCGGCGCGGC CGAGCTGGGC
CCGTACCGCC ACTACATGCA GAAGGAGATC TTCGAGCAGC CGCGCGCCAT CGGCGACACG
CTCGAAGGCG TCGAGGCGAT CGCGCCCGAG CTGTTCGGCG ACGGTGCCGC GCAGGTCTTC
GCCGAGATCG ACAAGGTGCT GATCCTGGCC TGCGGCACCA GCTCCTACAG CGGCATGACG
GCCAAGTACT GGCTCGAAAG CATCGCCAAG GTGCCGGCGC AGGTCGAGGT GGCGAGCGAA
TACCGCTACC GCGACAGCGT GCCCGACCCG AAGACGCTGG TCGTCACCAT CAGCCAGAGC
GGCGAGACCG CCGACACGCT GGCCGCGCTG AAACACGCGC GCAGCCTGGG CATGACCAAC
ACGCTGACGA TCTGCAACGT CTCGACCAGC GCGATGGTGC GCGAGTGCAA GCTGGCCTAC
ATCACGCGCG CGGGCGTCGA GATCGGCGTG GCCTCGACCA AGGCCTTCAC GACCCAGCTC
GCCGGCCTGT TCCTGCTGAC GCTGGCGCTG GCCAAGGTGC GCGGCCACCT CACCGCCGAG
GCCGAAGCCG ACCATCTGAA GGCCATGCGC CACCTGCCGG TCGCGCTGCA AGCCGTGCTG
GCGCTCGAGC CGCAGGTGAT CGCCTGGGCC GAGGACTTCG CCAGCAAGGA AAACGCGCTG
TTCCTGGGCC GCGGCCTGCA CTACCCGATC GCGCTCGAAG GCGCGCTCAA GCTCAAGGAA
ATCAGCTACA TCCACGCCGA GGCCTACCCG GCCGGCGAGC TCAAGCACGG ACCGCTGGCG
CTGGTGACGA GCGCGATGCC GGTGGTGACG GTGGCGCCCA ACGACGCGCT GCTGGAAAAG
CTCAAGAGCA ACATCCAGGA AGTGAAGGCC CGTGGCGGCC AGCTCTACGT GTTTGCGGAT
GCCGACACCC GCATCGAGAG CGATGCCGGC GTGCACGTGA TCCGCATGCC CGAGCACTAC
GGCGCGCTCA GCCCGATCCT GCACGTGGTG CCGCTGCAGC TGCTGGCCTA TCACACCGCC
TGCGCCCGCG GCACCGACGT CGACAAGCCG CGCAACCTGG CCAAGAGCGT GACGGTGGAG
TGA
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| Protein sequence | MCGIVGAVSQ RNIVPILIQG LQRLEYRGYD SCGVAVHQGG ELRRARSTSR VAELDAQVLQ
DGVEGLIGIA HTRWATHGAP AVHNAHPHFS HGTGADAKSA KAGRIALVHN GIIENHDELR
AELQARGYEF SSQTDTEVIA HLVDSLYEGD LFDAVQRALP QLRGAYAIAV FCREEPQRVV
GAREGSPLVL GVGKGETFLA SDAMALAGVT DQIVYLEEGD VVDMQQGKYW ITARADGGAR
PRVDRPVKTV HAHSGAAELG PYRHYMQKEI FEQPRAIGDT LEGVEAIAPE LFGDGAAQVF
AEIDKVLILA CGTSSYSGMT AKYWLESIAK VPAQVEVASE YRYRDSVPDP KTLVVTISQS
GETADTLAAL KHARSLGMTN TLTICNVSTS AMVRECKLAY ITRAGVEIGV ASTKAFTTQL
AGLFLLTLAL AKVRGHLTAE AEADHLKAMR HLPVALQAVL ALEPQVIAWA EDFASKENAL
FLGRGLHYPI ALEGALKLKE ISYIHAEAYP AGELKHGPLA LVTSAMPVVT VAPNDALLEK
LKSNIQEVKA RGGQLYVFAD ADTRIESDAG VHVIRMPEHY GALSPILHVV PLQLLAYHTA
CARGTDVDKP RNLAKSVTVE
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